RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 OR1M1Q8NGA1 313 aa22.65■■□□□ 1.22
CPNE1-216ENST00000437340 GCDHQ92947 438 aaPredicted RBP22.65■■□□□ 1.22
CPNE1-216ENST00000437340 ADAT3Q96EY9 351 aaPredicted RBP22.65■■□□□ 1.22
CPNE1-216ENST00000437340 NUDT15Q9NV35 164 aa22.65■■□□□ 1.22
CPNE1-216ENST00000437340 KLK11Q9UBX7 282 aa22.65■■□□□ 1.22
CPNE1-216ENST00000437340 LDLRAD4O15165 306 aa22.64■■□□□ 1.22
CPNE1-216ENST00000437340 CYTIPO60759 359 aa22.64■■□□□ 1.22
CPNE1-216ENST00000437340 GNALP38405 381 aa22.64■■□□□ 1.22
CPNE1-216ENST00000437340 RSPO4Q2I0M5 234 aaPredicted RBP22.64■■□□□ 1.22
CPNE1-216ENST00000437340 ROBO4Q8WZ75 1007 aa22.64■■□□□ 1.22
CPNE1-216ENST00000437340 UQCC2Q9BRT2 126 aa22.64■■□□□ 1.22
CPNE1-216ENST00000437340 ACTR6Q9GZN1 396 aa22.64■■□□□ 1.22
CPNE1-216ENST00000437340 HRASLSQ9HDD0 168 aa22.64■■□□□ 1.22
CPNE1-216ENST00000437340 RHBDD3Q9Y3P4 386 aa22.64■■□□□ 1.22
CPNE1-216ENST00000437340 PHF3Q92576 2039 aaKnown RBP22.64■■□□□ 1.21
CPNE1-216ENST00000437340 A0A0A6YYH2 397 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 A6NJ64 397 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 MT-ND4P03905 459 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 RAB3AP20336 220 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 KCNJ8Q15842 424 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 OLFML2AQ68BL7 652 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 BTN2A1Q7KYR7 527 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 DOK3Q7L591 496 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 AAED1Q7RTV5 226 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 ABHD12BQ7Z5M8 362 aaPredicted RBP22.63■■□□□ 1.21
CPNE1-216ENST00000437340 NEK6Q9HC98 313 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 C7orf66A4D0T2 115 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 APOC1P02654 83 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 ERCC1P07992 297 aaPredicted RBP22.63■■□□□ 1.21
CPNE1-216ENST00000437340 ZNF20P17024 532 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 RRAS2P62070 204 aaPredicted RBP22.63■■□□□ 1.21
CPNE1-216ENST00000437340 ELFN2Q5R3F8 820 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 IGF2-ASQ6U949 168 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 LINC00696Q6ZRV3 163 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 CPT1CQ8TCG5 803 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 METTL17Q9H7H0 456 aaPredicted RBP22.63■■□□□ 1.21
CPNE1-216ENST00000437340 GPR84Q9NQS5 396 aa22.63■■□□□ 1.21
CPNE1-216ENST00000437340 H7C417 338 aa22.62■■□□□ 1.21
CPNE1-216ENST00000437340 OTX1P32242 354 aaPredicted RBP22.62■■□□□ 1.21
CPNE1-216ENST00000437340 TGIF1Q15583 401 aa22.62■■□□□ 1.21
CPNE1-216ENST00000437340 ZFP69Q49AA0 526 aa22.62■■□□□ 1.21
CPNE1-216ENST00000437340 RIPPLY2Q5TAB7 128 aa22.62■■□□□ 1.21
CPNE1-216ENST00000437340 PGAP1Q75T13 922 aa22.62■■□□□ 1.21
CPNE1-216ENST00000437340 BIVMQ86UB2 503 aa22.62■■□□□ 1.21
CPNE1-216ENST00000437340 GPR137CQ8N3F9 429 aa22.62■■□□□ 1.21
CPNE1-216ENST00000437340 SLC22A24Q8N4F4 322 aa22.62■■□□□ 1.21
CPNE1-216ENST00000437340 AKAP1Q92667 903 aaKnown RBP eCLIP22.62■■□□□ 1.21
CPNE1-216ENST00000437340 SCMH1Q96GD3 660 aa22.62■■□□□ 1.21
CPNE1-216ENST00000437340 TTTY12Q9BZ98 90 aa22.62■■□□□ 1.21
CPNE1-216ENST00000437340 ATG5Q9H1Y0 275 aa22.62■■□□□ 1.21
CPNE1-216ENST00000437340 TAS2R8Q9NYW2 309 aa22.62■■□□□ 1.21
CPNE1-216ENST00000437340 MTFP1Q9UDX5 166 aa22.62■■□□□ 1.21
CPNE1-216ENST00000437340 N6AMT1Q9Y5N5 214 aa22.62■■□□□ 1.21
CPNE1-216ENST00000437340 FREM2Q5SZK8 3169 aa22.62■■□□□ 1.21
CPNE1-216ENST00000437340 CNTRLQ7Z7A1 2325 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 SLC2A1P11166 492 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 RAB6AP20340 208 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 CCR6P51684 374 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 RAB25P57735 213 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 SSBP1Q04837 148 aaKnown RBP22.61■■□□□ 1.21
CPNE1-216ENST00000437340 CCDC92Q53HC0 331 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-216ENST00000437340 FAM57BQ71RH2 274 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 CDH26Q8IXH8 852 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 OR56B4Q8NH76 319 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 TMEM45BQ96B21 275 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 HES7Q9BYE0 225 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 KCNK15Q9H427 330 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 PLA2G3Q9NZ20 509 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 ZNF319Q9P2F9 582 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 SLC5A6Q9Y289 635 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 KLF13Q9Y2Y9 288 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-216ENST00000437340 TRAV6A0A075B6T7 132 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 RBBP9O75884 186 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 NTF4P34130 210 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 LHX2P50458 406 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 GALK2Q01415 458 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 CAMK2BQ13554 666 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 COMMD2Q86X83 199 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 TCTE3Q8IZS6 198 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 GALNT16Q8N428 558 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 LRRC18Q8N456 261 aa22.61■■□□□ 1.21
CPNE1-216ENST00000437340 ZNF775Q96BV0 537 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-216ENST00000437340 TRAV18A0A075B6X5 111 aa22.6■■□□□ 1.21
CPNE1-216ENST00000437340 A0A0U1RQV5 110 aa22.6■■□□□ 1.21
CPNE1-216ENST00000437340 A8MV72 311 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-216ENST00000437340 KDM4BO94953 1096 aa22.6■■□□□ 1.21
CPNE1-216ENST00000437340 IGLV3-1P01715 115 aa22.6■■□□□ 1.21
CPNE1-216ENST00000437340 SP1P08047 785 aa22.6■■□□□ 1.21
CPNE1-216ENST00000437340 CST2P09228 141 aa22.6■■□□□ 1.21
CPNE1-216ENST00000437340 H2AFB2P0C5Z0 115 aa22.6■■□□□ 1.21
CPNE1-216ENST00000437340 PTHLHP12272 177 aa22.6■■□□□ 1.21
CPNE1-216ENST00000437340 SLC25A25Q6KCM7 469 aa22.6■■□□□ 1.21
CPNE1-216ENST00000437340 MDS2Q8NDY4 140 aa22.6■■□□□ 1.21
CPNE1-216ENST00000437340 OR4D6Q8NGJ1 314 aa22.6■■□□□ 1.21
CPNE1-216ENST00000437340 CRLF2Q9HC73 371 aa22.6■■□□□ 1.21
CPNE1-216ENST00000437340 RANGRFQ9HD47 186 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-216ENST00000437340 TMEM38BQ9NVV0 291 aa22.6■■□□□ 1.21
CPNE1-216ENST00000437340 MRPL15Q9P015 296 aaKnown RBP22.6■■□□□ 1.21
CPNE1-216ENST00000437340 POU2F3Q9UKI9 436 aa22.6■■□□□ 1.21
CPNE1-216ENST00000437340 PAIP2BQ9ULR5 123 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms