RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 ZNF404Q494X3 552 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 Q6YL49 198 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 Q6ZS46 218 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 TSEN54Q7Z6J9 526 aaKnown RBP3.68□□□□□ -1.82
LINC01239-202ENST00000436786 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.68□□□□□ -1.82
LINC01239-202ENST00000436786 FITM2Q8N6M3 262 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 KIR3DL3Q8N743 410 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 FAM156AQ8NDB6 213 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 BHLHE23Q8NDY6 225 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 C19orf18Q8NEA5 215 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 OR8B3Q8NGG8 313 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 OR5L1Q8NGL2 311 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 APOBEC3DQ96AK3 386 aaPredicted RBP3.68□□□□□ -1.82
LINC01239-202ENST00000436786 OR8B2Q96RD0 313 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 SLC30A2Q9BRI3 323 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 NUDT16L1Q9BRJ7 211 aaKnown RBP3.68□□□□□ -1.82
LINC01239-202ENST00000436786 CDADC1Q9BWV3 514 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 NUAK2Q9H093 628 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 PRDM13Q9H4Q3 707 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 MARCH7Q9H992 704 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 SAR1AQ9NR31 198 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 TMEM100Q9NV29 134 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 GID8Q9NWU2 228 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 CMTM6Q9NX76 183 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 VSX1Q9NZR4 365 aaPredicted RBP3.68□□□□□ -1.82
LINC01239-202ENST00000436786 BLOC1S6Q9UL45 172 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 MMP24Q9Y5R2 645 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 IER3IP1Q9Y5U9 82 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 LHFPL6Q9Y693 200 aa3.68□□□□□ -1.82
LINC01239-202ENST00000436786 A0A1B0GWJ7 208 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 IQCF6A8MYZ5 107 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 J3QW42 95 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 CXCR6O00574 342 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 NDUFB2O95178 105 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 FSTL3O95633 263 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 KNG1P01042 644 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 SFTPBP07988 381 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 SDHAP31040 664 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 CDKN2AP42771 156 aaKnown RBP3.67□□□□□ -1.82
LINC01239-202ENST00000436786 RGS6P49758 472 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 RAG2P55895 527 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 HIST1H3AP68431 136 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 HOXA4Q00056 320 aaPredicted RBP3.67□□□□□ -1.82
LINC01239-202ENST00000436786 LIPEQ05469 1076 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 MAB21L1Q13394 359 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 ZNF181Q2M3W8 571 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 IFI44LQ53G44 452 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 HIST2H3PS2Q5TEC6 136 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 WDR25Q64LD2 544 aaPredicted RBP3.67□□□□□ -1.82
LINC01239-202ENST00000436786 RUSC1-AS1Q66K80 236 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 CORO6Q6QEF8 472 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 FIP1L1Q6UN15 594 aaKnown RBP3.67□□□□□ -1.82
LINC01239-202ENST00000436786 ZNF841Q6ZN19 808 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 PTCHD4Q6ZW05 846 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 HIST2H3AQ71DI3 136 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 RRM2BQ7LG56 351 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 NLRC3Q7RTR2 1065 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 NAA40Q86UY6 237 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 GJC3Q8NFK1 279 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 FAM46AQ96IP4 442 aaKnown RBP3.67□□□□□ -1.82
LINC01239-202ENST00000436786 HSH2DQ96JZ2 352 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 TSSK2Q96PF2 358 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 COQ7Q99807 217 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 BEX1Q9HBH7 125 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 NRIP3Q9NQ35 241 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 C1RLQ9NZP8 487 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 CLN8Q9UBY8 286 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 TMCC3Q9ULS5 477 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 POLR1DQ9Y2S0 133 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 C22orf46C9J442 243 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 F8W735 103 aaPredicted RBP3.67□□□□□ -1.82
LINC01239-202ENST00000436786 DCTN6O00399 190 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 GSTA4O15217 222 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 FAM20BO75063 409 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 SERPINA1P01009 418 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 CRYBA1P05813 215 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 MELTFP08582 738 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 FPR3P25089 353 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 RPS6KA3P51812 740 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 FXYD6P3P58550 94 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 KRTAP10-3P60369 221 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 GK2Q14410 553 aaPredicted RBP3.67□□□□□ -1.82
LINC01239-202ENST00000436786 MAPRE2Q15555 327 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 MPPED2Q15777 294 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 KRTAP27-1Q3LI81 207 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 CLEC12AQ5QGZ9 265 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 ZNF362Q5T0B9 420 aaPredicted RBP3.67□□□□□ -1.82
LINC01239-202ENST00000436786 GPR157Q5UAW9 335 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 PRAMEF6Q5VXH4 476 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 OLFML2AQ68BL7 652 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 GPR139Q6DWJ6 353 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 CGB2Q6NT52 195 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 DPY19L2P2Q6ZN68 376 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 CFAP77Q6ZQR2 320 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 C17orf107Q6ZR85 190 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 DCDC5Q6ZRR9 648 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 COLCA1Q6ZS62 124 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 FKBP9P1Q75LS8 142 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 CYP4Z1Q86W10 505 aa3.67□□□□□ -1.82
LINC01239-202ENST00000436786 SLC15A3Q8IY34 581 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms