RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 C1QTNF5Q9BXJ0 243 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 MROQ9BYG7 248 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 SP140LQ9H930 580 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 RNPEPL1Q9HAU8 725 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 DECR2Q9NUI1 292 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 NKX1-2Q9UD57 310 aaPredicted RBP13.29□□□□□ -0.28
TREX1-201ENST00000433541 GTF2A1LQ9UNN4 478 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 KLHDC2Q9Y2U9 406 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 ITPR3Q14573 2671 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 PHYHO14832 338 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 CASQ2O14958 399 aaPredicted RBP13.28□□□□□ -0.28
TREX1-201ENST00000433541 SPRY3O43610 288 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 ENTPD6O75354 484 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 F12P00748 615 aaPredicted RBP13.28□□□□□ -0.28
TREX1-201ENST00000433541 TIGD6Q17RP2 521 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 RSPO1Q2MKA7 263 aaPredicted RBP13.28□□□□□ -0.28
TREX1-201ENST00000433541 OGFRL1Q5TC84 451 aaPredicted RBP13.28□□□□□ -0.28
TREX1-201ENST00000433541 TTC23Q5W5X9 447 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 PRSS57Q6UWY2 283 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 USP51Q70EK9 711 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 FAM57BQ71RH2 274 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 PGAP1Q75T13 922 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 ZNF525Q8N782 197 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 NEU4Q8WWR8 484 aaPredicted RBP13.28□□□□□ -0.28
TREX1-201ENST00000433541 PGAM5Q96HS1 289 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 Q96MT0 163 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 RHNO1Q9BSD3 238 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 VCX3BQ9H321 246 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 ADGRL4Q9HBW9 690 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 CYSLTR2Q9NS75 346 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 AASSQ9UDR5 926 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 PURGQ9UJV8 347 aaKnown RBP13.28□□□□□ -0.28
TREX1-201ENST00000433541 LRP12Q9Y561 859 aa13.28□□□□□ -0.28
TREX1-201ENST00000433541 C17orf100A8MU93 164 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 SBK2P0C263 348 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 DAOP14920 347 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 RAC2P15153 192 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 SELEP16581 610 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 ALOX5APP20292 161 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 LIPAP38571 399 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 OPRL1P41146 370 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 MTNR1AP48039 350 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 RIDAP52758 137 aaKnown RBP13.27□□□□□ -0.29
TREX1-201ENST00000433541 PRSS12P56730 875 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 ZNF121P58317 390 aaPredicted RBP13.27□□□□□ -0.29
TREX1-201ENST00000433541 SNRPGP62308 76 aaKnown RBP13.27□□□□□ -0.29
TREX1-201ENST00000433541 CCL8P80075 99 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 PSG7Q13046 419 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 TESK1Q15569 626 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 TSTQ16762 297 aaKnown RBP13.27□□□□□ -0.29
TREX1-201ENST00000433541 SNAI3Q3KNW1 292 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 OR2T2Q6IF00 324 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 SPNS3Q6ZMD2 512 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 COMMD2Q86X83 199 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 TGIF2LYQ8IUE0 185 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 ENTHD1Q8IYW4 607 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 SETD9Q8NE22 299 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 OR2AE1Q8NHA4 323 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 SPRYD4Q8WW59 207 aaPredicted RBP13.27□□□□□ -0.29
TREX1-201ENST00000433541 FAM168AQ92567 244 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 GTF3AQ92664 365 aaKnown RBP13.27□□□□□ -0.29
TREX1-201ENST00000433541 RNFT2Q96EX2 444 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 MNTQ99583 582 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 NIPAL2Q9H841 368 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 MSL2Q9HCI7 577 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 HAO2Q9NYQ3 351 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 CGGBP1Q9UFW8 167 aaPredicted RBP13.27□□□□□ -0.29
TREX1-201ENST00000433541 COPS3Q9UNS2 423 aa13.27□□□□□ -0.29
TREX1-201ENST00000433541 GGT3PA6NGU5 568 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 SMAD7O15105 426 aaKnown RBP13.26□□□□□ -0.29
TREX1-201ENST00000433541 SLC16A6O15403 523 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 XRCC2O43543 280 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 CLIC3O95833 236 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 CSF3P09919 207 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 TNFSF4P23510 183 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 OTX1P32242 354 aaPredicted RBP13.26□□□□□ -0.29
TREX1-201ENST00000433541 PDLIM4P50479 330 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 TMED1Q13445 227 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 GK2Q14410 553 aaPredicted RBP13.26□□□□□ -0.29
TREX1-201ENST00000433541 OCLNQ16625 522 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 PCGF3Q3KNV8 242 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 KRTAP27-1Q3LI81 207 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 GLYATL3Q5SZD4 288 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 ZNF322Q6U7Q0 402 aaPredicted RBP13.26□□□□□ -0.29
TREX1-201ENST00000433541 FBXW12Q6X9E4 464 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 RHOUQ7L0Q8 258 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 OR2Z1Q8NG97 314 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 HAVCR1Q96D42 359 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 OR10A2Q9H208 303 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 CELSR1Q9NYQ6 3014 aa13.26□□□□□ -0.29
TREX1-201ENST00000433541 AKAP9Q99996 3911 aa13.25□□□□□ -0.29
TREX1-201ENST00000433541 TRIM64A6NGJ6 449 aa13.25□□□□□ -0.29
TREX1-201ENST00000433541 TRIM64BA6NI03 449 aa13.25□□□□□ -0.29
TREX1-201ENST00000433541 KRT8P05787 483 aa13.25□□□□□ -0.29
TREX1-201ENST00000433541 OR2T7P0C7T2 308 aa13.25□□□□□ -0.29
TREX1-201ENST00000433541 MAGEB1P43366 347 aa13.25□□□□□ -0.29
TREX1-201ENST00000433541 DSCR9P59020 149 aa13.25□□□□□ -0.29
TREX1-201ENST00000433541 PSMA6P60900 246 aaKnown RBP13.25□□□□□ -0.29
TREX1-201ENST00000433541 ZNF829Q3KNS6 432 aaPredicted RBP13.25□□□□□ -0.29
TREX1-201ENST00000433541 COLCA1Q6ZS62 124 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms