RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 WDR76Q9H967 626 aa12.38□□□□□ -0.43
PRKDC-203ENST00000432581 KRCC1Q9NPI7 259 aaPredicted RBP12.38□□□□□ -0.43
PRKDC-203ENST00000432581 TNFRSF19Q9NS68 423 aa12.38□□□□□ -0.43
PRKDC-203ENST00000432581 C1RLQ9NZP8 487 aa12.38□□□□□ -0.43
PRKDC-203ENST00000432581 PDP1Q9P0J1 537 aaPredicted RBP12.38□□□□□ -0.43
PRKDC-203ENST00000432581 RPS6KA6Q9UK32 745 aa12.38□□□□□ -0.43
PRKDC-203ENST00000432581 CAPN7Q9Y6W3 813 aa12.38□□□□□ -0.43
PRKDC-203ENST00000432581 ENPP4Q9Y6X5 453 aa12.38□□□□□ -0.43
PRKDC-203ENST00000432581 ZNF879B4DU55 563 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 TNFRSF13BO14836 293 aaPredicted RBP12.37□□□□□ -0.43
PRKDC-203ENST00000432581 TIMM23O14925 209 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 SLC22A2O15244 555 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 FAM20BO75063 409 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 SERPINA1P01009 418 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 H1F0P07305 194 aaKnown RBP12.37□□□□□ -0.43
PRKDC-203ENST00000432581 MELTFP08582 738 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 ACSM4P0C7M7 580 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 CFHR2P36980 270 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 CDKN2AP42771 156 aaKnown RBP12.37□□□□□ -0.43
PRKDC-203ENST00000432581 RAD23AP54725 363 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 SRSF4Q08170 494 aaKnown RBP12.37□□□□□ -0.43
PRKDC-203ENST00000432581 GK2Q14410 553 aaPredicted RBP12.37□□□□□ -0.43
PRKDC-203ENST00000432581 MEP1BQ16820 701 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 RSPO1Q2MKA7 263 aaPredicted RBP12.37□□□□□ -0.43
PRKDC-203ENST00000432581 KRTAP27-1Q3LI81 207 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 CLEC12AQ5QGZ9 265 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 CORO6Q6QEF8 472 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 ZNF620Q6ZNG0 422 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 SLC15A3Q8IY34 581 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 GATAD2BQ8WXI9 593 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 RCN3Q96D15 328 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 SLC22A4Q9H015 551 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 MMADHCQ9H3L0 296 aaPredicted RBP12.37□□□□□ -0.43
PRKDC-203ENST00000432581 FN3KRPQ9HA64 309 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 TRIM36Q9NQ86 728 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 ERVK-18Q9QC07 812 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 RNF7Q9UBF6 113 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 TMCC3Q9ULS5 477 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 AURKCQ9UQB9 309 aa12.37□□□□□ -0.43
PRKDC-203ENST00000432581 FAM32AQ9Y421 112 aaKnown RBP12.37□□□□□ -0.43
PRKDC-203ENST00000432581 WNK1Q9H4A3 2382 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 IGLV1-36A0A0B4J1U3 117 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 UNC119BA6NIH7 251 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 TOX4O94842 621 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 MDH1P40925 334 aaKnown RBP12.36□□□□□ -0.43
PRKDC-203ENST00000432581 OMPP47874 163 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 RELBQ01201 579 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 SLC36A3Q495N2 470 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 FGD3Q5JSP0 725 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 RUSC1-AS1Q66K80 236 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 PGAP1Q75T13 922 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 HDXQ7Z353 690 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 PNLDC1Q8NA58 520 aaKnown RBP12.36□□□□□ -0.43
PRKDC-203ENST00000432581 TBC1D15Q8TC07 691 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 SPRYD4Q8WW59 207 aaPredicted RBP12.36□□□□□ -0.43
PRKDC-203ENST00000432581 DYRK2Q92630 601 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 TSSK2Q96PF2 358 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 PITX2Q99697 317 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 TRIM15Q9C019 465 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 VIPAS39Q9H9C1 493 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 UFSP2Q9NUQ7 469 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 GMPR2Q9P2T1 348 aaKnown RBP12.36□□□□□ -0.43
PRKDC-203ENST00000432581 B9D1Q9UPM9 204 aa12.36□□□□□ -0.43
PRKDC-203ENST00000432581 CENPVL3A0A0U1RRI6 287 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 F5H5K5 113 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 LGALS8O00214 317 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 DCTN6O00399 190 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 NDUFA2O43678 99 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 PPP1R3DO95685 299 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 LCATP04180 440 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 SFTPBP07988 381 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 MMP9P14780 707 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 RHCEP18577 417 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 FXYD6P3P58550 94 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 TRAP1Q12931 704 aaKnown RBP12.35□□□□□ -0.43
PRKDC-203ENST00000432581 OR8G1Q15617 311 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 METTL11BQ5VVY1 283 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 PRAMEF6Q5VXH4 476 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 SLC18B1Q6NT16 456 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 SMARCD3Q6STE5 483 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 TSEN54Q7Z6J9 526 aaKnown RBP12.35□□□□□ -0.43
PRKDC-203ENST00000432581 PLPP7Q8NBV4 271 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 C19orf18Q8NEA5 215 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 SLC26A10Q8NG04 563 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 OR2AJ1Q8NGZ0 328 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 RP9Q8TA86 221 aaKnown RBP12.35□□□□□ -0.43
PRKDC-203ENST00000432581 FAM162AQ96A26 154 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 SLCO4A1Q96BD0 722 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 WDFY2Q96P53 400 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 ERMAPQ96PL5 475 aaPredicted RBP12.35□□□□□ -0.43
PRKDC-203ENST00000432581 TBX15Q96SF7 602 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 ATF6BQ99941 703 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 HOPXQ9BPY8 73 aaPredicted RBP12.35□□□□□ -0.43
PRKDC-203ENST00000432581 ACOXLQ9NUZ1 547 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 FGFR1OP2Q9NVK5 253 aa12.35□□□□□ -0.43
PRKDC-203ENST00000432581 TRAV38-1A0A0B4J264 116 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 NDUFAB1O14561 156 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 GMDSO60547 372 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 PTBP3O95758 552 aaKnown RBP12.34□□□□□ -0.43
PRKDC-203ENST00000432581 RENP00797 406 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms