RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 SNAPC3Q92966 411 aa12.95□□□□□ -0.34
RFTN1-203ENST00000432519 FAM71F1Q96KD3 344 aaPredicted RBP12.95□□□□□ -0.34
RFTN1-203ENST00000432519 GINS4Q9BRT9 223 aa12.95□□□□□ -0.34
RFTN1-203ENST00000432519 GPR84Q9NQS5 396 aa12.95□□□□□ -0.34
RFTN1-203ENST00000432519 STMN3Q9NZ72 180 aa12.95□□□□□ -0.34
RFTN1-203ENST00000432519 ZNF69Q9UC07 566 aa12.95□□□□□ -0.34
RFTN1-203ENST00000432519 ITGB1BP2Q9UKP3 347 aa12.95□□□□□ -0.34
RFTN1-203ENST00000432519 BDKRB2P30411 391 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 B3GALT5-AS1P59052 145 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 OC90Q02509 493 aaPredicted RBP12.94□□□□□ -0.34
RFTN1-203ENST00000432519 TMEM81Q6P7N7 255 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 DBX2Q6ZNG2 339 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 FAM57BQ71RH2 274 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 OR1M1Q8NGA1 313 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 OR4S1Q8NGB4 309 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 OR2T35Q8NGX2 323 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 TRAF4Q9BUZ4 470 aaPredicted RBP12.94□□□□□ -0.34
RFTN1-203ENST00000432519 GON7Q9BXV9 100 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 ZNF436Q9C0F3 470 aaPredicted RBP12.94□□□□□ -0.34
RFTN1-203ENST00000432519 TINAGL1Q9GZM7 467 aaPredicted RBP12.94□□□□□ -0.34
RFTN1-203ENST00000432519 LOC102725191A0A1B0GVB3 256 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 PINLYPA6NC86 204 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 OR5H15A6NDH6 313 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 B4E171 279 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 GP1BAP07359 652 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 TSPAN7P41732 249 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 RSPO1Q2MKA7 263 aaPredicted RBP12.94□□□□□ -0.34
RFTN1-203ENST00000432519 ZBTB44Q8NCP5 570 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 OR6N1Q8NGY5 312 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 SLC17A5Q9NRA2 495 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 FOXJ2Q9P0K8 574 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 PIPOXQ9P0Z9 390 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 KLK13Q9UKR3 277 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 ING4Q9UNL4 249 aa12.94□□□□□ -0.34
RFTN1-203ENST00000432519 A0A1W2PP11 408 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 C9orf172C9J069 976 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 RAB27BO00194 218 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 VSIG8P0DPA2 414 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 HTR2BP41595 481 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 CX3CR1P49238 355 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 RGS19P49795 217 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 QRFPP83859 136 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 ENDOGQ14249 297 aaKnown RBP12.93□□□□□ -0.34
RFTN1-203ENST00000432519 TAF13Q15543 124 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 NDUFA5Q16718 116 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 LGALSLQ3ZCW2 172 aaPredicted RBP12.93□□□□□ -0.34
RFTN1-203ENST00000432519 PLXDC2Q6UX71 529 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 RAB11FIP2Q7L804 512 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 TMEM123Q8N131 208 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 OR9K2Q8NGE7 335 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 NABP1Q96AH0 204 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 NPTNQ9Y639 398 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 A0A087WZY1 265 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 MEGF11A6BM72 1044 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 SMAD9O15198 467 aaKnown RBP12.93□□□□□ -0.34
RFTN1-203ENST00000432519 SIX6O95475 246 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 RLN1P04808 185 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 DBHP09172 617 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 SP9P0CG40 484 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 CSNK1A1P48729 337 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 METTL11BQ5VVY1 283 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 STEAP1BQ6NZ63 245 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 ZNF529Q6P280 563 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 SLC36A1Q7Z2H8 476 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.93□□□□□ -0.34
RFTN1-203ENST00000432519 OR5AS1Q8N127 324 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 GABRG1Q8N1C3 465 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 GVQW1Q8N7I0 195 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 C15orf40Q8WUR7 153 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 PSMF1Q92530 271 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 LIN37Q96GY3 246 aaPredicted RBP12.93□□□□□ -0.34
RFTN1-203ENST00000432519 UTP23Q9BRU9 249 aaKnown RBP12.93□□□□□ -0.34
RFTN1-203ENST00000432519 NICN1Q9BSH3 213 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 TMEM138Q9NPI0 162 aa12.93□□□□□ -0.34
RFTN1-203ENST00000432519 FREM1Q5H8C1 2179 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 LRRC3CA6NJW4 275 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 CBR3O75828 277 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 CSF1P09603 554 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 DNASE1P24855 282 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 SUCLG1P53597 346 aaKnown RBP12.92□□□□□ -0.34
RFTN1-203ENST00000432519 CLDN15P56746 228 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 ARMC10Q8N2F6 343 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 ESX1Q8N693 406 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 TMEM104Q8NE00 496 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 LYZL4Q96KX0 146 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 SORCS2Q96PQ0 1159 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 RBM24Q9BX46 236 aaKnown RBP12.92□□□□□ -0.34
RFTN1-203ENST00000432519 HEXA-AS1Q9H8Q6 139 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 MGAT4CQ9UBM8 478 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 ZNF407Q9C0G0 2248 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 EP300Q09472 2414 aaPredicted RBP12.92□□□□□ -0.34
RFTN1-203ENST00000432519 A0A1B0GVI7 797 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 F5H5K5 113 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 TNFRSF10AO00220 468 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 CSN2P05814 226 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 RFC3P40938 356 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 PRSS12P56730 875 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 RBMS2Q15434 407 aaKnown RBP12.92□□□□□ -0.34
RFTN1-203ENST00000432519 KCNMB1Q16558 191 aa12.92□□□□□ -0.34
RFTN1-203ENST00000432519 ZNF626Q68DY1 528 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms