RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 ZNF48Q96MX3 618 aaPredicted RBP13.53□□□□□ -0.24
AC055876.3-201ENST00000431496 CDRT15Q96T59 188 aa13.53□□□□□ -0.24
AC055876.3-201ENST00000431496 ATF6BQ99941 703 aa13.53□□□□□ -0.24
AC055876.3-201ENST00000431496 IL1RAPQ9NPH3 570 aa13.53□□□□□ -0.24
AC055876.3-201ENST00000431496 PNRC2Q9NPJ4 139 aaKnown RBP13.53□□□□□ -0.24
AC055876.3-201ENST00000431496 SNX3O60493 162 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 HLA-DQA2P01906 255 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 LCATP04180 440 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 FABP3P05413 133 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 RRM2P31350 389 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 PRSS12P56730 875 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 GNB2P62879 340 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 TRAP1Q12931 704 aaKnown RBP13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 TSPAN31Q12999 210 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 MALLQ13021 153 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 BAMBIQ13145 260 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 MAB21L1Q13394 359 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 ZNF404Q494X3 552 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 SAMD4BQ5PRF9 694 aaKnown RBP13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 FAM201AQ5SY85 155 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 SLC35F1Q5T1Q4 408 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 BTNL3Q6UXE8 466 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 CELF2-AS1Q8N7Q2 184 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 SDR9C7Q8NEX9 313 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 Q8TCH9 128 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 ERGIC1Q969X5 290 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 SLCO4A1Q96BD0 722 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 NEIL1Q96FI4 390 aaPredicted RBP13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 PLEKHA8Q96JA3 519 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 C1orf147Q96MC9 270 aaPredicted RBP13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 NSMCE2Q96MF7 247 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 DUX5Q96PT3 197 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 DDOQ99489 341 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 ZNF747Q9BV97 191 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 MS4A7Q9GZW8 240 aaPredicted RBP13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 FAM107BQ9H098 131 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 FN3KQ9H479 309 aa13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 ZMAT3Q9HA38 289 aaKnown RBP13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 MRPL22Q9NWU5 206 aaKnown RBP13.52□□□□□ -0.25
AC055876.3-201ENST00000431496 IGHV2-70DA0A0C4DH43 119 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 KIR2DS1A0A191URI9 304 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 DNAJC9-AS1A6NH13 148 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 ARPC2O15144 300 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 IGHV4-38-2P0DP08 117 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 CD200P41217 278 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 HMGA2P52926 109 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 TPTEP56180 551 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 PGBD2Q6P3X8 592 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 ZNF620Q6ZNG0 422 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 PGAP1Q75T13 922 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 PGAM4Q8N0Y7 254 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 UPRTQ96BW1 309 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 MAP6Q96JE9 813 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 NSRP1Q9H0G5 558 aaKnown RBP13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 KCNG2Q9UJ96 466 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 PCDHGB1Q9Y5G3 927 aa13.51□□□□□ -0.25
AC055876.3-201ENST00000431496 CLDN34H7C241 214 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 KRT36O76013 467 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 IRF2P14316 349 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 ZNF823P16415 610 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 MTNR1AP48039 350 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 PITPNBP48739 271 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 RAD23AP54725 363 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 CLEC12AQ5QGZ9 265 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 C9orf139Q6ZV77 190 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 NLRC3Q7RTR2 1065 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 CPLX4Q7Z7G2 160 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 ZDHHC21Q8IVQ6 265 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 PARP8Q8N3A8 854 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 OR8B3Q8NGG8 313 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 OR10S1Q8NGN2 331 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 OR11L1Q8NGX0 322 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 SPRYD4Q8WW59 207 aaPredicted RBP13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 SPTSSAQ969W0 71 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 OR8B2Q96RD0 313 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 EGLN3Q9H6Z9 239 aa13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 SOX21Q9Y651 276 aaPredicted RBP13.5□□□□□ -0.25
AC055876.3-201ENST00000431496 MEGF8Q7Z7M0 2845 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 TRRAPQ9Y4A5 3859 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 IGHV3OR16-10A0A075B7F0 116 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 CD300LBA8K4G0 201 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 M0R135 149 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 FAM20BO75063 409 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 PLATP00750 562 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 RNASE1P07998 156 aaKnown RBP13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 PYCR1P32322 319 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 SLC9A3R2Q15599 337 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 MPPED2Q15777 294 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 SPATS1Q496A3 300 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 ZNF362Q5T0B9 420 aaPredicted RBP13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 SHISA2Q6UWI4 295 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 LYPD2Q6UXB3 125 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 DCDC5Q6ZRR9 648 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 CYB561A3Q8NBI2 242 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 ZNRF4Q8WWF5 429 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 SLC25A28Q96A46 364 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 ZNF799Q96GE5 643 aa13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 NUDT16L1Q9BRJ7 211 aaKnown RBP13.49□□□□□ -0.25
AC055876.3-201ENST00000431496 SLC22A4Q9H015 551 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms