RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 NMUP48645 174 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 CSNK1DP48730 415 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 ZNF136P52737 540 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 NUTF2P61970 127 aaKnown RBP2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 PRR3P79522 188 aaKnown RBP2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 SLC7A9P82251 487 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 TCP10Q12799 353 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 ECH1Q13011 328 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 CLINT1Q14677 625 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 SF3A2Q15428 464 aaKnown RBP2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 OR7A5Q15622 319 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 KCTD19Q17RG1 926 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 TMEM183BQ1AE95 376 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 PIP5KL1Q5T9C9 394 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 UBE2UQ5VVX9 321 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 ANKRD22Q5VYY1 191 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 STUMQ69YW2 141 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 APOBEC3HQ6NTF7 200 aaKnown RBP2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 C6orf120Q7Z4R8 191 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 SH2D6Q7Z4S9 175 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 TMCO2Q7Z6W1 182 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 CBLN2Q8IUK8 224 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 APRG1Q8IVJ8 170 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 TMEM183AQ8IXX5 376 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 CMTM1Q8IZ96 169 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 MDS2Q8NDY4 140 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 OR56A4Q8NGH8 313 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 OR9G4Q8NGQ1 327 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 OR52E5Q8NH55 327 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 OR4S2Q8NH73 311 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 OR5K2Q8NHB8 316 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 LYPD6BQ8NI32 183 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 GEMIN6Q8WXD5 167 aaKnown RBP2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 SRSF12Q8WXF0 261 aaKnown RBP2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 CYYR1Q96J86 154 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 CHAC1Q9BUX1 264 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 TEKT3Q9BXF9 490 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 CLMPQ9H6B4 373 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 SLCO1B3Q9NPD5 702 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 ZNF331Q9NQX6 463 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 NUFIP1Q9UHK0 495 aaKnown RBP2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 TBX21Q9UL17 535 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 CELA1Q9UNI1 258 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 GOLT1BQ9Y3E0 138 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 CHTOPQ9Y3Y2 248 aaKnown RBP2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 HEBP2Q9Y5Z4 205 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 CACNG2Q9Y698 323 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 ZDBF2Q9HCK1 2354 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 XIRP2A4UGR9 3374 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 CDH23Q9H251 3354 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 SSC5DA1L4H1 1573 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 CACNA1BQ00975 2339 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 NFASCO94856 1347 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 SMCO2A6NFE2 343 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 LYRM9A8MSI8 78 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 H0Y9J4 135 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 SMKR1H3BMG3 65 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 GOLGA8TH3BQL2 631 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 PES1O00541 588 aaKnown RBP2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZBTB5O15062 677 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 LSM1O15116 133 aaKnown RBP2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 CD5LO43866 347 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 ICOSLGO75144 302 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 GNAO1P09471 354 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 ACSM4P0C7M7 580 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 CYBAP13498 195 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 IL9P15248 144 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 ATF6P18850 670 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 TUBG1P23258 451 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 OR1E1P30953 314 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 TNFSF9P41273 254 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 CXCL5P42830 114 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 RPS10P46783 165 aaKnown RBP2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 HMGCS1Q01581 520 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 SP4Q02446 784 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 GGTLC2Q14390 218 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 TRAM2Q15035 370 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 POU2AF1Q16633 256 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 KLHL40Q2TBA0 621 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 AGBL2Q5U5Z8 902 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 SPESP1Q6UW49 350 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 IGFL2Q6UWQ7 119 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZNF493Q6ZR52 646 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 OTUD6AQ7L8S5 288 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 STRADAQ7RTN6 431 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 CMC1Q7Z7K0 106 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 TMEM150AQ86TG1 271 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 UBALD2Q8IYN6 164 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 MREGQ8N565 214 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 NOXO1Q8NFA2 376 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 OR51G1Q8NGK1 321 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 OR5B3Q8NH48 314 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 NUBPLQ8TB37 319 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 GPX8Q8TED1 209 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 TMEM158Q8WZ71 300 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 ISG20Q96AZ6 181 aaKnown RBP2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZNF707Q96C28 371 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 PRRC1Q96M27 445 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 SERPINB12Q96P63 405 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms