RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 A0A087WV62 115 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 TRAV1-2A0A0B4J238 106 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 OR8U9P0C7N5 309 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 EFNB1P98172 346 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 NAAAQ02083 359 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 PIP5KL1Q5T9C9 394 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 Q6ZSR6 202 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 TSEN54Q7Z6J9 526 aaKnown RBP13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 C1QL4Q86Z23 238 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 HIST3H2BBQ8N257 126 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 ZNF664Q8N3J9 261 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 TMEM239Q8WW34 195 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 MALSU1Q96EH3 234 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 TIMM29Q9BSF4 260 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 APOBEC3BQ9UH17 382 aaKnown RBP13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 LATO43561 262 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 VAMP3Q15836 100 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 SLC25A24Q6NUK1 477 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 ZNF100Q8IYN0 542 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 TMEM99Q8N816 258 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 NKD1Q969G9 470 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 NUDT11Q96G61 164 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 NOX4Q9NPH5 578 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 PRODH2Q9UF12 536 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 SLC7A7Q9UM01 511 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 HTTP42858 3142 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 A0A1W2PS29 197 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 E9PQ18 207 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 FGF16O43320 207 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 RPP14O95059 124 aaKnown RBP13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 SCGB1D2O95969 90 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 MAS1P04201 325 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 SNRPNP63162 240 aaKnown RBP13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 JOSD1Q15040 202 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 ZXDCQ2QGD7 858 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 ZNF550Q7Z398 422 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 ANGPTL5Q86XS5 388 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 LMLNQ96KR4 655 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 OR5B12Q96R08 314 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 PARD6GQ9BYG4 376 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 KCNE5Q9UJ90 142 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 EXOGQ9Y2C4 368 aaKnown RBP13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 CDHR4A6H8M9 788 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 CD74P04233 296 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 CFIP05156 583 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 CD79AP11912 226 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 SRMP19623 302 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 SNCAP37840 140 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 NAA10P41227 235 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 CSNK1G2P78368 415 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 PMS2P11Q13670 270 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 KIAA0895LQ68EN5 471 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 ZNF620Q6ZNG0 422 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 LRP11Q86VZ4 500 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 VRK2Q86Y07 508 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 OR8U1Q8NH10 309 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 CNN2Q99439 309 aaKnown RBP13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 ARHGDIGQ99819 225 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 ADAM19Q9H013 955 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 MRPL22Q9NWU5 206 aaKnown RBP13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 PTPRDP23468 1912 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 OTOL1A6NHN0 477 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 XRCC3O43542 346 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 GPRIN2O60269 458 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 DHRS2Q13268 280 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 ZNF619Q8N2I2 560 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 BBS1Q8NFJ9 593 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 MESP1Q9BRJ9 268 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 MED20Q9H944 212 aa13.03□□□□□ -0.32
SYNGAP1-203ENST00000428982 IFITM5A6NNB3 132 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 SOD3P08294 240 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 TRGC1P0CF51 173 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 CRYBA2P53672 197 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 YPEL5P62699 121 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 RANP62826 216 aaKnown RBP13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 IL10RAQ13651 578 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 C16orf54Q6UWD8 224 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 TSEN15Q8WW01 171 aaKnown RBP13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 CDX2Q99626 313 aaPredicted RBP13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 TXN2Q99757 166 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 WWTR1Q9GZV5 400 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 CHST6Q9GZX3 395 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 KNL1Q8NG31 2342 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 LOC102724200A0A096LPH7 203 aaPredicted RBP13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 C9J4A7 227 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 TMPRSS11DO60235 418 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 EIF4E2O60573 245 aaKnown RBP13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 ZNF542PQ5EBM4 170 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 RPUSD3Q6P087 351 aaKnown RBP13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 SLC48A1Q6P1K1 146 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 FAHD2BQ6P2I3 314 aaPredicted RBP13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 NR2C2APQ86WQ0 139 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 MMP21Q8N119 569 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 OR5L2Q8NGL0 311 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 GALNT14Q96FL9 552 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 FAHD2AQ96GK7 314 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 MRGPRX1Q96LB2 322 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 PRRT1Q99946 306 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms