RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 F5H5K5 113 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 NME4O00746 187 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 CCDC22O60826 627 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 PPP1R3DO95685 299 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 RHCEP18577 417 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 CRABP1P29762 137 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 RAG2P55895 527 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 GK2Q14410 553 aaPredicted RBP13.75□□□□□ -0.21
VARS-216ENST00000428445 ZNF181Q2M3W8 571 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 CLEC12AQ5QGZ9 265 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 HACD2Q6Y1H2 254 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 DPY19L2P2Q6ZN68 376 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 OR6V1Q8N148 313 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 SLCO4A1Q96BD0 722 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 RSRC1Q96IZ7 334 aaKnown RBP13.75□□□□□ -0.21
VARS-216ENST00000428445 COQ7Q99807 217 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 PRDM13Q9H4Q3 707 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 CCDC134Q9H6E4 229 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 B9D1Q9UPM9 204 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 MMP24Q9Y5R2 645 aa13.75□□□□□ -0.21
VARS-216ENST00000428445 C5orf63A6NC05 138 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 LRRC30A6NM36 301 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 TXNDC12O95881 172 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 CRYBA1P05813 215 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 ACSM4P0C7M7 580 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 COX4I1P13073 169 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 RPS6KA3P51812 740 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 POU4F2Q12837 409 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 FGD3Q5JSP0 725 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 GPR157Q5UAW9 335 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 C8orf82Q6P1X6 216 aaPredicted RBP13.74□□□□□ -0.21
VARS-216ENST00000428445 DNM1P34Q6PK57 102 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 NLRC3Q7RTR2 1065 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 OR52J3Q8NH60 311 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 TECTBQ96PL2 329 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 ERMAPQ96PL5 475 aaPredicted RBP13.74□□□□□ -0.21
VARS-216ENST00000428445 TBX15Q96SF7 602 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 NMNAT3Q96T66 252 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 MMADHCQ9H3L0 296 aaPredicted RBP13.74□□□□□ -0.21
VARS-216ENST00000428445 FN3KQ9H479 309 aa13.74□□□□□ -0.21
VARS-216ENST00000428445 NOTCH1P46531 2555 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 IGLV1-36A0A0B4J1U3 117 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 CENPVL3A0A0U1RRI6 287 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 UNC119BA6NIH7 251 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 C3orf80F5H4A9 247 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 FCN3O75636 299 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 LCATP04180 440 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 H1F0P07305 194 aaKnown RBP13.73□□□□□ -0.21
VARS-216ENST00000428445 MELTFP08582 738 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 IRF2P14316 349 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 CA6P23280 308 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 CFHR2P36980 270 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 PSMB10P40306 273 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 MDH1P40925 334 aaKnown RBP13.73□□□□□ -0.21
VARS-216ENST00000428445 GSK3BP49841 420 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 SLC7A2P52569 658 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 RAD23AP54725 363 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 KRTAP27-1Q3LI81 207 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 OLFML2AQ68BL7 652 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 C17orf107Q6ZR85 190 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 DCDC5Q6ZRR9 648 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 COLCA1Q6ZS62 124 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 RHOUQ7L0Q8 258 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 PDZD9Q8IXQ8 264 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 C1orf87Q8N0U7 546 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 ERGIC1Q969X5 290 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 FAM162AQ96A26 154 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 CCT8L2Q96SF2 557 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 PITX2Q99697 317 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 HCAR1Q9BXC0 346 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 HDHD2Q9H0R4 259 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 BEX1Q9HBH7 125 aa13.73□□□□□ -0.21
VARS-216ENST00000428445 A0A1B0GWJ7 208 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 SASH3O75995 380 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 TOX4O94842 621 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 MMP9P14780 707 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 RPS27P42677 84 aaKnown RBP13.72□□□□□ -0.21
VARS-216ENST00000428445 GATA4P43694 442 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 SMIM11AP58511 58 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 BPIFB3P59826 476 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 ELF3P78545 371 aaPredicted RBP13.72□□□□□ -0.21
VARS-216ENST00000428445 COX10Q12887 443 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 SLC18B1Q6NT16 456 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 BRICD5Q6PL45 260 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 FGFRL1Q8N441 504 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 FAM86B1Q8N7N1 296 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 CELF2-AS1Q8N7Q2 184 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 OR4F5Q8NH21 305 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 OR4K13Q8NH42 304 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 SMURF1Q9HCE7 757 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 PNRC2Q9NPJ4 139 aaKnown RBP13.72□□□□□ -0.21
VARS-216ENST00000428445 NDUFAF4Q9P032 175 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 AURKCQ9UQB9 309 aa13.72□□□□□ -0.21
VARS-216ENST00000428445 PHYHO14832 338 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 ENSAO43768 121 aaKnown RBP13.71□□□□□ -0.21
VARS-216ENST00000428445 GMNNO75496 209 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 HIST1H1CP16403 213 aaKnown RBP13.71□□□□□ -0.21
VARS-216ENST00000428445 CD200P41217 278 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 PRB3Q04118 309 aaPredicted RBP13.71□□□□□ -0.21
VARS-216ENST00000428445 ECH1Q13011 328 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms