RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 BRWD3Q6RI45 1802 aa1.52□□□□□ -2.17
PTPRC-208ENST00000427110 C10orf71Q711Q0 1435 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 PHF3Q92576 2039 aaKnown RBP1.51□□□□□ -2.17
PTPRC-208ENST00000427110 ZNF532Q9HCE3 1301 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 UQCRHLA0A096LP55 91 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 IGHV3-74A0A0B4J1X5 117 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 IGHV5-51A0A0C4DH38 117 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 RSPH10B2B2RC85 870 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 MRPS12O15235 138 aaKnown RBP1.51□□□□□ -2.17
PTPRC-208ENST00000427110 AIREO43918 545 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 RDH16O75452 317 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 ZNF324O75467 553 aaPredicted RBP1.51□□□□□ -2.17
PTPRC-208ENST00000427110 SRP72O76094 671 aaKnown RBP1.51□□□□□ -2.17
PTPRC-208ENST00000427110 DEXIO95424 95 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 H6PDO95479 791 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 TSPAN13O95857 204 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 HLA-DPB1P04440 258 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 SERPINA5P05154 406 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 UQCRHP07919 91 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 RSPH10BP0C881 870 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 ZNF250P15622 560 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 ZNF823P16415 610 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 PGAM1P18669 254 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 DCKP27707 260 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 AQP2P41181 271 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 SLC1A1P43005 524 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 NAMPTP43490 491 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 CSNK1A1P48729 337 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 NDUFA8P51970 172 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 ADARB1P78563 741 aaKnown RBP1.51□□□□□ -2.17
PTPRC-208ENST00000427110 SLC25A11Q02978 314 aaKnown RBP1.51□□□□□ -2.17
PTPRC-208ENST00000427110 TGM3Q08188 693 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 C16orf72Q14CZ0 275 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 STK38Q15208 465 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 MRPL23Q16540 153 aaKnown RBP1.51□□□□□ -2.17
PTPRC-208ENST00000427110 UBE2SQ16763 222 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 VAX1Q5SQQ9 334 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 THEM4Q5T1C6 240 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 KHDRBS2Q5VWX1 349 aaKnown RBP1.51□□□□□ -2.17
PTPRC-208ENST00000427110 RESP18Q5W5W9 173 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 CARD17Q5XLA6 110 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 FAM71E1Q6IPT2 247 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 NANOGP8Q6NSW7 305 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 REEP3Q6NUK4 255 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 DNAJC24Q6P3W2 148 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 TEX43Q6ZNM6 134 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 Q6ZSR3 168 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 FAM92BQ6ZTR7 304 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 SLC16A14Q7RTX9 510 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 LRRC8AQ8IWT6 810 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 SAXO1Q8IYX7 474 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 PGAM4Q8N0Y7 254 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 FAM86B1Q8N7N1 296 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 FBXL13Q8NEE6 735 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 OR10G4Q8NGN3 311 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 OR5W2Q8NH69 310 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 FAM81AQ8TBF8 368 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 RAB3IL1Q8TBN0 382 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 LKAAEAR1Q8TD35 194 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 ANKRD7Q92527 254 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 ELMO1Q92556 727 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 LRRC58Q96CX6 371 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 ECHDC3Q96DC8 303 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 PDXPQ96GD0 296 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 OR2A5Q96R48 311 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 MICU1Q9BPX6 476 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 C20orf24Q9BUV8 137 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 SLC25A2Q9BXI2 301 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 PARP12Q9H0J9 701 aaKnown RBP1.51□□□□□ -2.17
PTPRC-208ENST00000427110 ZNF160Q9HCG1 818 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 CYTL1Q9NRR1 136 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 HRASLS2Q9NWW9 162 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 CTSFQ9UBX1 484 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 PYCARDQ9ULZ3 195 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 ST3GAL6Q9Y274 331 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 SIPA1L1O43166 1804 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 RGPD3A6NKT7 1758 aaPredicted RBP1.51□□□□□ -2.17
PTPRC-208ENST00000427110 RGPD4Q7Z3J3 1758 aa1.51□□□□□ -2.17
PTPRC-208ENST00000427110 COL1A1P02452 1464 aaPredicted RBP1.5□□□□□ -2.17
PTPRC-208ENST00000427110 RLFQ13129 1914 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 ROBO3Q96MS0 1386 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 SLX4Q8IY92 1834 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 MN1Q10571 1320 aaPredicted RBP1.5□□□□□ -2.17
PTPRC-208ENST00000427110 IGLV4-60A0A075B6I1 120 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 ERICH2A1L162 156 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 OR2AG2A6NM03 316 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 TCP11X1B4DZS4 312 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 SPECC1L-ADORA2AF8WAN1 911 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 H0YHG0 523 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 GOLGA6L19H0YKK7 550 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 EIF3HO15372 352 aaKnown RBP eCLIP1.5□□□□□ -2.17
PTPRC-208ENST00000427110 B4GALT5O43286 388 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 AGTP01019 485 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 KRT14P02533 472 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 RETP07949 1114 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 TLX1NBP0CAT3 122 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 PABPC4LP0CB38 370 aaKnown RBP1.5□□□□□ -2.17
PTPRC-208ENST00000427110 UBTFL6P0CB48 400 aaPredicted RBP1.5□□□□□ -2.17
PTPRC-208ENST00000427110 CCNB1P14635 433 aa1.5□□□□□ -2.17
PTPRC-208ENST00000427110 RAB3BP20337 219 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms