RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 ZNF443Q9Y2A4 671 aaPredicted RBP14.37□□□□□ -0.11
PKP4-205ENST00000426248 PCDHGA1Q9Y5H4 931 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 A0A0G2JK05 382 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 TMEM235A6NFC5 223 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 CDC40O60508 579 aaKnown RBP eCLIP14.37□□□□□ -0.115e-9■□□□□ 8.6
PKP4-205ENST00000426248 IFNA6P05013 189 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 GAS1P54826 345 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 C4orf17Q53FE4 359 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 CDPF1Q6NVV7 123 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 NIPAL3Q6P499 406 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 TMEM205Q6UW68 189 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 ZNF227Q86WZ6 799 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 FLVCR1-AS1Q8TAF5 88 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 SLC41A3Q96GZ6 507 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 THOC3Q96J01 351 aaKnown RBP14.37□□□□□ -0.11
PKP4-205ENST00000426248 TEAD3Q99594 435 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 MMP26Q9NRE1 261 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 PRR19A6NJB7 356 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 BLOC1S5-TXNDC5H3BN57 136 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 IFNA10P01566 189 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 EIF5AL1Q6IS14 154 aaKnown RBP14.37□□□□□ -0.11
PKP4-205ENST00000426248 ZNF676Q8N7Q3 588 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 CCDC54Q8NEL0 328 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 C15orf40Q8WUR7 153 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 ZNF681Q96N22 645 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 TMEM9BQ9NQ34 198 aa14.37□□□□□ -0.11
PKP4-205ENST00000426248 A0A1W2PQM1 296 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 IFNGP01579 166 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 H2AFB1P0C5Y9 115 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 OR8U8P0C7N1 319 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 ZNF28P17035 718 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 SIRPAP78324 504 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 BATFQ16520 125 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 MED25Q71SY5 747 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 LCORQ96JN0 433 aaPredicted RBP14.36□□□□□ -0.11
PKP4-205ENST00000426248 METTL7AQ9H8H3 244 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 CES1P1Q9UKY3 287 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 KCNIP3Q9Y2W7 256 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 MED31Q9Y3C7 131 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 C7orf77A4D0Y5 90 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 TBX19O60806 448 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 SBK2P0C263 348 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 GIMD1P0DJR0 217 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 ZNF84P51523 738 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 OR8G1Q15617 311 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 SDR9C7Q8NEX9 313 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 OR51D1Q8NGF3 324 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 OR52E2Q8NGJ4 325 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 IGHV5-10-1A0A0J9YXX1 117 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 PLPP2O43688 288 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 OR13C7P0DN81 318 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 ZNF25P17030 456 aaPredicted RBP14.36□□□□□ -0.11
PKP4-205ENST00000426248 ALG10BQ5I7T1 473 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 DCAF12Q5T6F0 453 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 FOXN4Q96NZ1 517 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 INTS14Q96SY0 518 aa14.36□□□□□ -0.11
PKP4-205ENST00000426248 METTL8Q9H825 291 aaKnown RBP14.36□□□□□ -0.11
PKP4-205ENST00000426248 MRPS18AQ9NVS2 196 aaKnown RBP14.36□□□□□ -0.11
PKP4-205ENST00000426248 TRBV11-1A0A0K0K1C0 115 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 ZNF726A6NNF4 738 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 PMS2P2O95744 297 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 POU3F4P49335 361 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 PYY3Q5JQD4 70 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 ZNF836Q6ZNA1 936 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 KMT5CQ86Y97 462 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 CPNE4Q96A23 557 aaPredicted RBP14.35□□□□□ -0.11
PKP4-205ENST00000426248 IP6K3Q96PC2 410 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 UCK1Q9HA47 277 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 FOXJ3Q9UPW0 622 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 FANCMQ8IYD8 2048 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 IGHA1P01876 353 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 RAB40ALP0C0E4 278 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 ZGLP1P0C6A0 271 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 SFTPCP11686 197 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 COMTD1Q86VU5 262 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 RAB40AQ8WXH6 277 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 ANKRD9Q96BM1 317 aaPredicted RBP14.35□□□□□ -0.11
PKP4-205ENST00000426248 MISP3Q96FF7 219 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 ALX4Q9H161 411 aaPredicted RBP14.35□□□□□ -0.11
PKP4-205ENST00000426248 VCANP13611 3396 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 A0A087WZY1 265 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 C2orf72A6NCS6 295 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 RPS15P62841 145 aaKnown RBP14.35□□□□□ -0.11
PKP4-205ENST00000426248 BDH1Q02338 343 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 SQSTM1Q13501 440 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 INPP5JQ15735 1006 aaPredicted RBP14.35□□□□□ -0.11
PKP4-205ENST00000426248 SLC25A30Q5SVS4 291 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 WDR74Q6RFH5 385 aaPredicted RBP14.35□□□□□ -0.11
PKP4-205ENST00000426248 ZNF620Q6ZNG0 422 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 D2HGDHQ8N465 521 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 BPIFB2Q8N4F0 458 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 MORN4Q8NDC4 146 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 PPP1R14AQ96A00 147 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 MVB12AQ96EY5 273 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 KIRREL1Q96J84 757 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 KCNJ16Q9NPI9 418 aa14.35□□□□□ -0.11
PKP4-205ENST00000426248 A0A087WV62 115 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 DBX1A6NMT0 343 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 GDF9O60383 454 aa14.34□□□□□ -0.11
PKP4-205ENST00000426248 TCN2P20062 427 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms