RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ANKRD16Q6P6B7 361 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 PXT1Q8NFP0 134 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 ZDHHC12Q96GR4 267 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 EVA1AQ9H8M9 152 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 PARPBPQ9NWS1 579 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 SLC5A6Q9Y289 635 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 SLC22A23A1A5C7 686 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 H3BMH7 237 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 PATE4P0C8F1 98 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 GABRA1P14867 456 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 AMY2BP19961 511 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 GALP22466 123 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 MFAP5Q13361 173 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 MFSD13AQ14CX5 517 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 EBPQ15125 230 aaKnown RBP11.94□□□□□ -0.5
USP42-203ENST00000426246 HAGHLQ6PII5 290 aaPredicted RBP11.94□□□□□ -0.5
USP42-203ENST00000426246 GLIPR1L1Q6UWM5 242 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 SCARB1Q8WTV0 552 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 VN1R1Q9GZP7 353 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 WDR13Q9H1Z4 485 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 LSM5Q9Y4Y9 91 aaKnown RBP11.94□□□□□ -0.5
USP42-203ENST00000426246 B3GALT1Q9Y5Z6 326 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 DOCK10Q96BY6 2186 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 TECTAO75443 2155 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 TEX13DA0A0J9YY54 714 aaPredicted RBP11.94□□□□□ -0.5
USP42-203ENST00000426246 ZNF726A6NNF4 738 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 G3V3Q6 166 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 HSPB6O14558 160 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 ZNF208O43345 1280 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 ATG12O94817 140 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 SERPINF1P36955 418 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 ZXDAP98168 799 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 CFHR1Q03591 330 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 ATPAF1Q5TC12 328 aaPredicted RBP11.94□□□□□ -0.5
USP42-203ENST00000426246 CBLN2Q8IUK8 224 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 RAB33BQ9H082 229 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 AKIRIN1Q9H9L7 192 aaPredicted RBP11.94□□□□□ -0.5
USP42-203ENST00000426246 RNF215Q9Y6U7 377 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 PRR14LQ5THK1 2151 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 SHANK1Q9Y566 2161 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 ZNF354AO60765 605 aaPredicted RBP11.94□□□□□ -0.5
USP42-203ENST00000426246 CD53P19397 219 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 OPRM1P35372 400 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 CSNK2A1P68400 391 aaPredicted RBP11.94□□□□□ -0.5
USP42-203ENST00000426246 FOXF1Q12946 379 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 ALKBH2Q6NS38 261 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 TMEM71Q6P5X7 295 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 FAM122BQ7Z309 247 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 CMIPQ8IY22 773 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 CSNK2A3Q8NEV1 391 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 OR1S2Q8NGQ3 325 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 OR4K15Q8NH41 348 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 OR51B6Q9H340 312 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 TAS2R8Q9NYW2 309 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 HRH3Q9Y5N1 445 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 CSAG2Q9Y5P2 127 aa11.94□□□□□ -0.5
USP42-203ENST00000426246 SLC17A2O00624 439 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 ZNF93P35789 620 aaPredicted RBP11.93□□□□□ -0.5
USP42-203ENST00000426246 CLDN6P56747 220 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 ZNF660Q6AZW8 331 aaPredicted RBP11.93□□□□□ -0.5
USP42-203ENST00000426246 ADGRG3Q86Y34 549 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 TMEM104Q8NE00 496 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 OR51T1Q8NGJ9 327 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 STT3BQ8TCJ2 826 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 ADAT3Q96EY9 351 aaPredicted RBP11.93□□□□□ -0.5
USP42-203ENST00000426246 ZNF426Q9BUY5 554 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 GMEB2Q9UKD1 530 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 KLK13Q9UKR3 277 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 ICAM5Q9UMF0 924 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 VSTM2BA6NLU5 285 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 ANGPTL7O43827 346 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 ASAH2BP0C7U1 165 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 ZNF41P51814 821 aaPredicted RBP11.93□□□□□ -0.5
USP42-203ENST00000426246 RPS4XP62701 263 aaKnown RBP11.93□□□□□ -0.5
USP42-203ENST00000426246 HACD4Q5VWC8 232 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 BHLHE23Q8NDY6 225 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 SLC46A1Q96NT5 459 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 OR6C1Q96RD1 312 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 TEX51A0A1B0GUA7 166 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 FAM230AA0A1W2PPH8 454 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 MPTX1A8MV57 137 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 SOCS1O15524 211 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 SP6Q3SY56 376 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 ZNF440Q8IYI8 595 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 BPIFCQ8NFQ6 507 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 OR52N5Q8NH56 324 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 SLAMF6Q96DU3 332 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 CHRNA10Q9GZZ6 450 aa11.93□□□□□ -0.5
USP42-203ENST00000426246 D6RAR5 112 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 JMJD7P0C870 316 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 ID4P47928 161 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 RAET1LQ5VY80 246 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 OR4K17Q8NGC6 315 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 C11orf40Q8WZ69 217 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 HGDQ93099 445 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 PELOQ9BRX2 385 aaKnown RBP11.92□□□□□ -0.5
USP42-203ENST00000426246 BCL2L14Q9BZR8 327 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 WWTR1Q9GZV5 400 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 GPR84Q9NQS5 396 aa11.92□□□□□ -0.5
USP42-203ENST00000426246 NPDC1Q9NQX5 325 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms