RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 B3GNT2Q9NY97 397 aa10.24□□□□□ -0.77
UBR4-207ENST00000425413 SCP2D1Q9UJQ7 156 aa10.24□□□□□ -0.77
UBR4-207ENST00000425413 A0A1W2PP11 408 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 OR5H15A6NDH6 313 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 C19orf67A6NJJ6 358 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 AQP7P3A6NL99 342 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 ZNF878C9JN71 531 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 G3V3Q6 166 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 I3L521 148 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 SCO1O75880 301 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 STK17BO94768 372 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 GNB3P16520 340 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 FSTP19883 344 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 TCN2P20062 427 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 HOXA6P31267 233 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 CX3CR1P49238 355 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 STARP49675 285 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 DUSP3P51452 185 aaPredicted RBP10.23□□□□□ -0.77
UBR4-207ENST00000425413 EXOSC2Q13868 293 aaKnown RBP10.23□□□□□ -0.77
UBR4-207ENST00000425413 TMEM81Q6P7N7 255 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 C11orf88Q6PI97 169 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 ZNF813Q6ZN06 617 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 IDO2Q6ZQW0 420 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 ANGPTL5Q86XS5 388 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 CCDC28AQ8IWP9 274 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 CLEC1AQ8NC01 280 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 SUN5Q8TC36 379 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 GPX8Q8TED1 209 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 LIN37Q96GY3 246 aaPredicted RBP10.23□□□□□ -0.77
UBR4-207ENST00000425413 MICU1Q9BPX6 476 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 BANF2Q9H503 90 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 GPN1Q9HCN4 374 aaPredicted RBP10.23□□□□□ -0.77
UBR4-207ENST00000425413 COQ3Q9NZJ6 369 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 PISDQ9UG56 409 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 NCOA6Q14686 2063 aaPredicted RBP10.23□□□□□ -0.77
UBR4-207ENST00000425413 LOC102723996A0A087X1L8 192 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 NPIPA2E9PIF3 369 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 NPIPA3F8WFD2 350 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 ZIC3O60481 467 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 PRAF2O60831 178 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 MPC2O95563 127 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 ONECUT2O95948 504 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 CFDP00746 253 aaPredicted RBP10.23□□□□□ -0.77
UBR4-207ENST00000425413 ISG15P05161 165 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 LIFP15018 202 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 RFC3P40938 356 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 EIF1P41567 113 aaKnown RBP10.23□□□□□ -0.77
UBR4-207ENST00000425413 CSNK1A1P48729 337 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 SLC35A1P78382 337 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 MC2RQ01718 297 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 UNC119Q13432 240 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 CLPPQ16740 277 aaPredicted RBP10.23□□□□□ -0.77
UBR4-207ENST00000425413 MUC20Q8N307 709 aaPredicted RBP10.23□□□□□ -0.77
UBR4-207ENST00000425413 OR6X1Q8NH79 312 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 SORCS2Q96PQ0 1159 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 NICN1Q9BSH3 213 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 ZNF700Q9H0M5 742 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 ARRDC1-AS1Q9H2J1 176 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 KLK13Q9UKR3 277 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 FBXO4Q9UKT5 387 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 A0A0J9YW62 118 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 A0A1B0GTI1 187 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 MEGF11A6BM72 1044 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 WIPF3A6NGB9 483 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 GOSR2O14653 212 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 TRAPPC6AO75865 159 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 CYB5AP00167 134 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 DBHP09172 617 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 RAB3AP20336 220 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 GUCA1AP43080 201 aaPredicted RBP10.23□□□□□ -0.77
UBR4-207ENST00000425413 EXT1Q16394 746 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 SLC25A47Q6Q0C1 308 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 DEGS2Q6QHC5 323 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 PLXDC2Q6UX71 529 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 GTPBP8Q8N3Z3 284 aaPredicted RBP10.23□□□□□ -0.77
UBR4-207ENST00000425413 OR5D14Q8NGL3 314 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 GPER1Q99527 375 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 SELENOIQ9C0D9 397 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 HEXA-AS1Q9H8Q6 139 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 NPDC1Q9NQX5 325 aaPredicted RBP10.23□□□□□ -0.77
UBR4-207ENST00000425413 HDGFL3Q9Y3E1 203 aa10.23□□□□□ -0.77
UBR4-207ENST00000425413 EP300Q09472 2414 aaPredicted RBP10.23□□□□□ -0.77
UBR4-207ENST00000425413 ARID1AO14497 2285 aa10.22□□□□□ -0.77
UBR4-207ENST00000425413 NPIPB13A6NJU9 1138 aa10.22□□□□□ -0.77
UBR4-207ENST00000425413 NPIPB4C9JG80 1138 aa10.22□□□□□ -0.77
UBR4-207ENST00000425413 TMEM127O75204 238 aa10.22□□□□□ -0.77
UBR4-207ENST00000425413 LPLP06858 475 aa10.22□□□□□ -0.77
UBR4-207ENST00000425413 HCKP08631 526 aa10.22□□□□□ -0.77
UBR4-207ENST00000425413 VSIG8P0DPA2 414 aa10.22□□□□□ -0.77
UBR4-207ENST00000425413 ZNF35P13682 527 aa10.22□□□□□ -0.77
UBR4-207ENST00000425413 ZNF93P35789 620 aaPredicted RBP10.22□□□□□ -0.77
UBR4-207ENST00000425413 ARPC4P59998 168 aa10.22□□□□□ -0.77
UBR4-207ENST00000425413 CDNFQ49AH0 187 aa10.22□□□□□ -0.77
UBR4-207ENST00000425413 TOR2AQ5JU69 321 aa10.22□□□□□ -0.77
UBR4-207ENST00000425413 DCAF12L2Q5VW00 463 aa10.22□□□□□ -0.77
UBR4-207ENST00000425413 ZNF626Q68DY1 528 aa10.22□□□□□ -0.77
UBR4-207ENST00000425413 PAQR4Q8N4S7 273 aaPredicted RBP10.22□□□□□ -0.77
UBR4-207ENST00000425413 TMEM104Q8NE00 496 aa10.22□□□□□ -0.77
UBR4-207ENST00000425413 SLC25A43Q8WUT9 341 aaPredicted RBP10.22□□□□□ -0.77
UBR4-207ENST00000425413 ELMOD3Q96FG2 381 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms