RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 SLC17A7Q9P2U7 560 aa2.54□□□□□ -2
RAB3GAP1-202ENST00000425393 TUBGCP6Q96RT7 1819 aa2.54□□□□□ -2
RAB3GAP1-202ENST00000425393 YEATS2Q9ULM3 1422 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 IGHV3-72A0A0B4J1Y9 119 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 IGHV3OR16-9A0A0B4J2B5 98 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 C5orf63A6NC05 138 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 KRBOX1C9JBD0 128 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 H7C1H1 209 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 SLC9A3R1O14745 358 aaPredicted RBP2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 NVLO15381 856 aaKnown RBP2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 SLC22A5O76082 557 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 HPRT1P00492 218 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 CSNK2A2P19784 350 aaPredicted RBP2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 EIF2S2P20042 333 aaKnown RBP2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 LOXP28300 417 aaPredicted RBP2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 TNFSF9P41273 254 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 UQCRFS1P47985 274 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 CACNG7P62955 275 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 ZNF616Q08AN1 781 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 ILKQ13418 452 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 DNLZQ5SXM8 178 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 ADNP2Q6IQ32 1131 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 UNQ9165/PRO28630Q6UXU0 137 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 SSX9Q7RTT3 188 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 SNX20Q7Z614 316 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 MRPL55Q7Z7F7 128 aaKnown RBP2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 LUZP2Q86TE4 346 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 MYOCDQ8IZQ8 938 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 SPANXA2-OT1Q8N9U9 137 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 OR56A4Q8NGH8 313 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 SLC25A46Q96AG3 418 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 PRRC1Q96M27 445 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 UCK2Q9BZX2 261 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 AUNIPQ9H7T9 357 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 MRPS30Q9NP92 439 aaKnown RBP2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 ACP6Q9NPH0 428 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 PTTG3PQ9NZH4 202 aa2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 RCL1Q9Y2P8 373 aaKnown RBP2.53□□□□□ -2
RAB3GAP1-202ENST00000425393 ERCC6Q03468 1493 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 IGHV7-4-1A0A0J9YVY3 117 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 PLPP1O14494 284 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 CACNG3O60359 315 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 GLSO94925 669 aaPredicted RBP2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 LSM8O95777 96 aaKnown RBP2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 IGLV3-19P01714 112 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 RBM34P42696 430 aaKnown RBP2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 RPL23P62829 140 aaKnown RBP2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 SNRNP35Q16560 246 aaKnown RBP2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 TMEM53Q6P2H8 277 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 NKAIN4Q8IVV8 208 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 CBR4Q8N4T8 237 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 OR52E5Q8NH55 327 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 OR10G6Q8NH81 332 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 OR51E1Q8TCB6 317 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 RMI2Q96E14 147 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 BTN2A3PQ96KV6 586 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 RBBP8Q99708 897 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 FOXC2Q99958 501 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 GGTLC1Q9BX51 225 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 SLC7A5P2Q9GIP4 190 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 ZNF442Q9H7R0 627 aa2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 C20orf96Q9NUD7 363 aaPredicted RBP2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 NUP214P35658 2090 aaPredicted RBP2.52□□□□□ -2.01
RAB3GAP1-202ENST00000425393 PCDH11XQ9BZA7 1347 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 IGHV1-69DA0A0B4J2H0 117 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 M0R3G1 203 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 ERI3O43414 337 aaKnown RBP2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 CHST10O43529 356 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 CCNB2O95067 398 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 FGFR1OPO95684 399 aaKnown RBP2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 IGLV3-25P01717 112 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 IGHV3-11P01762 117 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 ZNF688P0C7X2 276 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 PGA5P0DJD9 388 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 USF1P22415 310 aaPredicted RBP2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 FABP6P51161 128 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 TAS2R31P59538 309 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 PITPNAQ00169 270 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 AP1ARQ63HQ0 302 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 STUMQ69YW2 141 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 SLC25A34Q6PIV7 304 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 APRG1Q8IVJ8 170 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 JAGN1Q8N5M9 183 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 C8orf31Q8N9H6 132 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 CCDC148Q8NFR7 591 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 RPEQ96AT9 228 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 GSDMAQ96QA5 445 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 C11orf70Q9BRQ4 267 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 TMEM27Q9HBJ8 222 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 EXOSC4Q9NPD3 245 aaKnown RBP2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 AGPAT4Q9NRZ5 378 aa2.51□□□□□ -2.01
RAB3GAP1-202ENST00000425393 CC2D2AQ9P2K1 1620 aa2.5□□□□□ -2.01
RAB3GAP1-202ENST00000425393 TRAV19A0A0A6YYK7 116 aa2.5□□□□□ -2.01
RAB3GAP1-202ENST00000425393 CENPVL3A0A0U1RRI6 287 aa2.5□□□□□ -2.01
RAB3GAP1-202ENST00000425393 NMT2O60551 498 aa2.5□□□□□ -2.01
RAB3GAP1-202ENST00000425393 HLA-HP01893 362 aa2.5□□□□□ -2.01
RAB3GAP1-202ENST00000425393 CLTAP09496 248 aa2.5□□□□□ -2.01
RAB3GAP1-202ENST00000425393 TACSTD2P09758 323 aa2.5□□□□□ -2.01
RAB3GAP1-202ENST00000425393 ZNF806P0C7X5 589 aa2.5□□□□□ -2.01
RAB3GAP1-202ENST00000425393 PGA4P0DJD7 388 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms