RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 LRRC30A6NM36 301 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 FAM20BO75063 409 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 SERPINA1P01009 418 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 SFTPBP07988 381 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 MELTFP08582 738 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 GGT2P36268 569 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 MDH1P40925 334 aaKnown RBP12.42□□□□□ -0.42
ATG4B-209ENST00000425239 SF3A3Q12874 501 aaKnown RBP eCLIP12.42□□□□□ -0.421e-6■■■■□ 19.8
ATG4B-209ENST00000425239 RUSC1-AS1Q66K80 236 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 FIP1L1Q6UN15 594 aaKnown RBP12.42□□□□□ -0.42
ATG4B-209ENST00000425239 CFAP77Q6ZQR2 320 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 ZBTB46Q86UZ6 589 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 C1orf87Q8N0U7 546 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 TMEM86BQ8N661 226 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 DHRS1Q96LJ7 313 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 MARCH7Q9H992 704 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 VIPAS39Q9H9C1 493 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 FGFR1OP2Q9NVK5 253 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 ARMCX1Q9P291 453 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 CYB5R1Q9UHQ9 305 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 RPS6KA6Q9UK32 745 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 TMCC3Q9ULS5 477 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 TMEM5Q9Y2B1 443 aa12.42□□□□□ -0.42
ATG4B-209ENST00000425239 ZNF879B4DU55 563 aa12.41□□□□□ -0.42
ATG4B-209ENST00000425239 CFHR2P36980 270 aa12.41□□□□□ -0.42
ATG4B-209ENST00000425239 GSK3BP49841 420 aa12.41□□□□□ -0.42
ATG4B-209ENST00000425239 RAG2P55895 527 aa12.41□□□□□ -0.42
ATG4B-209ENST00000425239 PRAMEF6Q5VXH4 476 aa12.41□□□□□ -0.42
ATG4B-209ENST00000425239 OLFML2AQ68BL7 652 aa12.41□□□□□ -0.42
ATG4B-209ENST00000425239 ASPHD2Q6ICH7 369 aa12.41□□□□□ -0.42
ATG4B-209ENST00000425239 FKBP9P1Q75LS8 142 aa12.41□□□□□ -0.42
ATG4B-209ENST00000425239 NLRC3Q7RTR2 1065 aa12.41□□□□□ -0.42
ATG4B-209ENST00000425239 RP9Q8TA86 221 aaKnown RBP12.41□□□□□ -0.42
ATG4B-209ENST00000425239 RSRC1Q96IZ7 334 aaKnown RBP12.41□□□□□ -0.42
ATG4B-209ENST00000425239 BEX1Q9HBH7 125 aa12.41□□□□□ -0.42
ATG4B-209ENST00000425239 SMURF1Q9HCE7 757 aa12.41□□□□□ -0.42
ATG4B-209ENST00000425239 SRA1Q9HD15 236 aaKnown RBP12.41□□□□□ -0.42
ATG4B-209ENST00000425239 AP3M1Q9Y2T2 418 aa12.41□□□□□ -0.42
ATG4B-209ENST00000425239 CLPSL1A2RUU4 121 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 C5orf63A6NC05 138 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 ARPC3O15145 178 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 SLC22A2O15244 555 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 SASH3O75995 380 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 KNG1P01042 644 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 H1F0P07305 194 aaKnown RBP12.4□□□□□ -0.42
ATG4B-209ENST00000425239 CRABP1P29762 137 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 NPY4RP50391 375 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 GPR157Q5UAW9 335 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 PGM2L1Q6PCE3 622 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 SMARCD3Q6STE5 483 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 RRM2BQ7LG56 351 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 LINC00346Q8IVM7 164 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 OR4F5Q8NH21 305 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 LINC01006Q8NI28 216 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 ZDHHC16Q969W1 377 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 SLCO4A1Q96BD0 722 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 MAP6Q96JE9 813 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 FAM71F1Q96KD3 344 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-209ENST00000425239 NMNAT3Q96T66 252 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 DDOQ99489 341 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 SIRPDQ9H106 197 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 TNFRSF19Q9NS68 423 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 MRPL22Q9NWU5 206 aaKnown RBP12.4□□□□□ -0.42
ATG4B-209ENST00000425239 POMT1Q9Y6A1 747 aa12.4□□□□□ -0.42
ATG4B-209ENST00000425239 A0A0G2JK05 382 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 OR6C68A6NDL8 312 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 UNC119BA6NIH7 251 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 F5H5K5 113 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 ENSAO43768 121 aaKnown RBP12.39□□□□□ -0.43
ATG4B-209ENST00000425239 CLPXO76031 633 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 LHBP01229 141 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 LIPFP07098 398 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 NCK1P16333 377 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 RHCEP18577 417 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 OTX1P32242 354 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-209ENST00000425239 RPS6KA3P51812 740 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 SLC7A2P52569 658 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 RFX4Q33E94 735 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 SFRP4Q6FHJ7 346 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-209ENST00000425239 HDXQ7Z353 690 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 ARPINQ7Z6K5 226 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-209ENST00000425239 FAM86B1Q8N7N1 296 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 ZNRF4Q8WWF5 429 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 WDFY2Q96P53 400 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 HOPXQ9BPY8 73 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-209ENST00000425239 PCGF1Q9BSM1 259 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 HCAR1Q9BXC0 346 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 RASSF4Q9H2L5 321 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 UFSP2Q9NUQ7 469 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 RNF7Q9UBF6 113 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 CAPN7Q9Y6W3 813 aa12.39□□□□□ -0.43
ATG4B-209ENST00000425239 P2RY10O00398 339 aa12.38□□□□□ -0.43
ATG4B-209ENST00000425239 TOX4O94842 621 aa12.38□□□□□ -0.43
ATG4B-209ENST00000425239 DIRAS1O95057 198 aa12.38□□□□□ -0.43
ATG4B-209ENST00000425239 TROVE2P10155 538 aaKnown RBP eCLIP12.38□□□□□ -0.434e-6■□□□□ 9.4
ATG4B-209ENST00000425239 PSKH1P11801 424 aa12.38□□□□□ -0.43
ATG4B-209ENST00000425239 COX4I1P13073 169 aa12.38□□□□□ -0.43
ATG4B-209ENST00000425239 H2AFXP16104 143 aaPredicted RBP12.38□□□□□ -0.43
ATG4B-209ENST00000425239 HIST1H1CP16403 213 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms