RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 ELOVL3Q9HB03 270 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 SERTAD3Q9UJW9 196 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 ENTPD2Q9Y5L3 495 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 WIF1Q9Y5W5 379 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 WNT6Q9Y6F9 365 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 COL6A3P12111 3177 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 SPINT1O43278 529 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 CYTIPO60759 359 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 CLEC3AO75596 197 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 KNG1P01042 644 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 TRGC2P03986 189 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 DBIP07108 87 aaKnown RBP10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 SLC35G4P0C7Q5 338 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 KLK2P20151 261 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 RAB4AP20338 218 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 RPS23P62266 143 aaKnown RBP10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 GUK1Q16774 197 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 ZNF385CQ66K41 422 aaPredicted RBP10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 ZNF679Q8IYX0 411 aa10.12□□□□□ -0.79
SEC61A1-202ENST00000424880 VPS13AQ96RL7 3174 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 TGIF2-C20orf24A0A0A6YYL0 155 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 GLCEO94923 617 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 ZNF205O95201 554 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 HLA-GP17693 338 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 CTXN1P60606 82 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 RASGEF1BQ0VAM2 473 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 BTNL8Q6UX41 500 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 OR56B1Q8NGI3 324 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 OR4D6Q8NGJ1 314 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 OVCA2Q8WZ82 227 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 SAT2Q96F10 170 aaPredicted RBP10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 LMLNQ96KR4 655 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 ZNF558Q96NG5 402 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 PELI2Q9HAT8 420 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 TRBV5-5A0A0J9YX44 114 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 C11orf98E9PRG8 122 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 MKRN2OSH3BPM6 223 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 IFNA17P01571 189 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 PRH1P02810 166 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 LINC00271P0C7V0 271 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 APLNRP35414 380 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 NUTF2P61970 127 aaKnown RBP10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 MFGE8Q08431 387 aaPredicted RBP10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 TOMM20Q15388 145 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 HMGN3Q15651 99 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 NPSR1Q6W5P4 371 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 KDM8Q8N371 416 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 TMEM52Q8NDY8 209 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 ASB16Q96NS5 453 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 LMAN2LQ9H0V9 348 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 DPEP2Q9H4A9 486 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 DUSP22Q9NRW4 184 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 INSL5Q9Y5Q6 135 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 PLXNA2O75051 1894 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 C17orf51A8MQB3 221 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 SLC17A2O00624 439 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 F10P00742 488 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 SERPINA2P20848 420 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 GDI1P31150 447 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 PCP4P48539 62 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 RAP1AP62834 184 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 ALG11Q2TAA5 492 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 ANKRD55Q3KP44 614 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 TPGS2Q68CL5 300 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 DGAT2L6Q6ZPD8 337 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 TCTN2Q96GX1 697 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 SLC25A44Q96H78 314 aaPredicted RBP10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 LRFN5Q96NI6 719 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 KLHDC3Q9BQ90 382 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 SLC5A7Q9GZV3 580 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 METTL9Q9H1A3 318 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 SH3BGRL3Q9H299 93 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 POMT1Q9Y6A1 747 aa10.11□□□□□ -0.79
SEC61A1-202ENST00000424880 LOC101059948A0A1B0GTJ6 334 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 HRKO00198 91 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 CYB5BO43169 146 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 LILRB3O75022 631 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 ABHD16AO95870 558 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 ACAA2P42765 397 aaKnown RBP10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 CLEC18BQ6UXF7 455 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 STARD5Q9NSY2 213 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 MRPL22Q9NWU5 206 aaKnown RBP10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 ADAM29Q9UKF5 820 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 LSM5Q9Y4Y9 91 aaKnown RBP10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 HS3ST3B1Q9Y662 390 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 KPTNQ9Y664 436 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 LTBP2Q14767 1821 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 HIST1H2BKO60814 126 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 TIMP1P01033 207 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 HIST1H2BJP06899 126 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 HIST1H2BOP23527 126 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 HIST1H2BBP33778 126 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 CCR2P41597 374 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 HIST1H2BDP58876 126 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 HIST1H2BCP62807 126 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 GGTLC2Q14390 218 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 HIST2H2BEQ16778 126 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 TMEM225Q6GV28 225 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 HSD17B11Q8NBQ5 300 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms