RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 Q6ZR03 302 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 SPATC1Q76KD6 591 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 AMIGO2Q86SJ2 522 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 OR5AS1Q8N127 324 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 ZNF511Q8NB15 262 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 LRTOMTQ8WZ04 291 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 SEMA6AQ9H2E6 1030 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 WDR76Q9H967 626 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 SAP30LQ9HAJ7 183 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 DECR2Q9NUI1 292 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 STARD10Q9Y365 291 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 N6AMT1Q9Y5N5 214 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 CLDN25C9JDP6 229 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 PRR23D1E9PI22 279 aaPredicted RBP10.94□□□□□ -0.66
VRK3-203ENST00000424804 J3QLI3 93 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 EBAG9O00559 213 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 PRR23D2P0DMB1 279 aaPredicted RBP10.94□□□□□ -0.66
VRK3-203ENST00000424804 PAICSP22234 425 aaKnown RBP10.94□□□□□ -0.66
VRK3-203ENST00000424804 SLC6A9P48067 706 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 RPS7P62081 194 aaKnown RBP10.94□□□□□ -0.66
VRK3-203ENST00000424804 PSG7Q13046 419 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 CDK5R2Q13319 367 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 TAF13Q15543 124 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 KLHL12Q53G59 568 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 ZNF362Q5T0B9 420 aaPredicted RBP10.94□□□□□ -0.66
VRK3-203ENST00000424804 PLBD1Q6P4A8 553 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 ERI1Q8IV48 349 aaKnown RBP10.94□□□□□ -0.66
VRK3-203ENST00000424804 OR5K1Q8NHB7 308 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 ZNF418Q8TF45 676 aaPredicted RBP10.94□□□□□ -0.66
VRK3-203ENST00000424804 CMBLQ96DG6 245 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 DDOQ99489 341 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 COQ7Q99807 217 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 SLC6A7Q99884 636 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 ATF6BQ99941 703 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 RBM4Q9BWF3 364 aaKnown RBP10.94□□□□□ -0.66
VRK3-203ENST00000424804 TEX12Q9BXU0 123 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 NTN4Q9HB63 628 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 MSL2Q9HCI7 577 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 PAPOLBQ9NRJ5 636 aaKnown RBP10.94□□□□□ -0.66
VRK3-203ENST00000424804 CMC2Q9NRP2 79 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 CENPMQ9NSP4 180 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 TBCCD1Q9NVR7 557 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 CYB5R1Q9UHQ9 305 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 COMMD3-BMI1R4GMX3 469 aa10.94□□□□□ -0.66
VRK3-203ENST00000424804 G3V2T6 193 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 TRAPPC2LH3BP13 241 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 ZNF593O00488 134 aaPredicted RBP10.93□□□□□ -0.66
VRK3-203ENST00000424804 WIPF1O43516 503 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 IGHV2-70P01814 119 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 LCATP04180 440 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 GGT2P36268 569 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 ENTPD1P49961 510 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 SLC25A1P53007 311 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 PRSS12P56730 875 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 HIST1H3AP68431 136 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 HLXQ14774 488 aaPredicted RBP10.93□□□□□ -0.66
VRK3-203ENST00000424804 ATP6AP1Q15904 470 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 HFEQ30201 348 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 HIST2H3PS2Q5TEC6 136 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 HIST2H3AQ71DI3 136 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 ASRGL1Q7L266 308 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 DCXRQ7Z4W1 244 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 C1orf174Q8IYL3 243 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 OR5L1Q8NGL2 311 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 OR6N2Q8NGY6 317 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 PYDC1Q8WXC3 89 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 CCL17Q92583 94 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 RAB1CQ92928 201 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 UTP4Q969X6 686 aaKnown RBP10.93□□□□□ -0.66
VRK3-203ENST00000424804 RAB39BQ96DA2 213 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 ELMOD3Q96FG2 381 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 MAP6Q96JE9 813 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 DCLRE1CQ96SD1 692 aaKnown RBP10.93□□□□□ -0.66
VRK3-203ENST00000424804 COPS4Q9BT78 406 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 HCAR1Q9BXC0 346 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 MMP26Q9NRE1 261 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 KRT84Q9NSB2 600 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 TVP23BQ9NYZ1 205 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 KCNG2Q9UJ96 466 aa10.93□□□□□ -0.66
VRK3-203ENST00000424804 POLR3KQ9Y2Y1 108 aaPredicted RBP10.93□□□□□ -0.66
VRK3-203ENST00000424804 A0A0G2JMP0 313 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 A0A0X1KG70 313 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 SAC3D1A6NKF1 404 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 H3BSA7 217 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 SURF4O15260 269 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 MITFO75030 526 aaPredicted RBP10.92□□□□□ -0.66
VRK3-203ENST00000424804 HMGN1P05114 100 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 PSKH1P11801 424 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 FCGR1AP12314 374 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 RGS6P49758 472 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 DAPP51397 102 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 TPTEP56180 551 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 LCN2P80188 198 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 EIF2B1Q14232 305 aaKnown RBP10.92□□□□□ -0.66
VRK3-203ENST00000424804 SNAPC1Q16533 368 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 KLF17Q5JT82 389 aaPredicted RBP10.92□□□□□ -0.66
VRK3-203ENST00000424804 DCAF12L2Q5VW00 463 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 NAA40Q86UY6 237 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 ZDHHC13Q8IUH4 622 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 CPOQ8IVL8 374 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms