RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SGCEO43556 437 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 FMO6PO60774 539 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 CH25HO95992 272 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 SNRPAP09012 282 aaKnown RBP5.04□□□□□ -1.6
SDCBP-203ENST00000424270 CST2P09228 141 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 DUX4L4P0CJ87 422 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 ACADSP16219 412 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 GGT2P36268 569 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 SERPINB5P36952 375 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 PAFAH1B1P43034 410 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 OR12D2P58182 307 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 CBX1P83916 185 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 CAV1Q03135 178 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 SLC34A1Q06495 639 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 FMODQ06828 376 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 SCRN3Q0VDG4 424 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 MAB21L1Q13394 359 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 ABCA11PQ4W5N1 156 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 WDR38Q5JTN6 314 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 FAM27BQ5VT28 67 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 C16orf89Q6UX73 402 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 ZNF621Q6ZSS3 439 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 C18orf65Q6ZTR6 163 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 OR2W3Q7Z3T1 314 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 ZNF329Q86UD4 541 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 ZNF695Q8IW36 515 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 CELF2-AS1Q8N7Q2 184 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 SLC26A10Q8NG04 563 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 PIFOQ8TCI5 191 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 ACOT11Q8WXI4 607 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-203ENST00000424270 FOXRED1Q96CU9 486 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-203ENST00000424270 PANX1Q96RD7 426 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 ATF6BQ99941 703 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 TM2D3Q9BRN9 247 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 ERP44Q9BS26 406 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 ADAT1Q9BUB4 502 aaKnown RBP5.04□□□□□ -1.6
SDCBP-203ENST00000424270 KCNK9Q9NPC2 374 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 STX18Q9P2W9 335 aaKnown RBP5.04□□□□□ -1.6
SDCBP-203ENST00000424270 UTP11Q9Y3A2 253 aaKnown RBP5.04□□□□□ -1.6
SDCBP-203ENST00000424270 NUP214P35658 2090 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-203ENST00000424270 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-203ENST00000424270 PRSS51A0A1B0GVH4 220 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 A0A1W2PPH5 198 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 CXorf65A6NEN9 183 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 CCDC154A6NI56 674 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 IQCF6A8MYZ5 107 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 C5orf58C9J3I9 102 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 H3BSH0 61 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 DEDDO75618 318 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 TRMUO75648 421 aaKnown RBP5.03□□□□□ -1.6
SDCBP-203ENST00000424270 ARG1P05089 322 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 SNRNP70P08621 437 aaKnown RBP5.03□□□□□ -1.6
SDCBP-203ENST00000424270 HCKP08631 526 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 VIMP08670 466 aaKnown RBP5.03□□□□□ -1.6
SDCBP-203ENST00000424270 TCP1P17987 556 aaKnown RBP5.03□□□□□ -1.6
SDCBP-203ENST00000424270 FSTP19883 344 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 MSR1P21757 451 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 CA6P23280 308 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 SLC6A1P30531 599 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 GRK5P34947 590 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 CD200P41217 278 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 POU3F4P49335 361 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 CAPZA1P52907 286 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 TXNL4AP83876 142 aaKnown RBP5.03□□□□□ -1.6
SDCBP-203ENST00000424270 MALLQ13021 153 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 MAD2L1Q13257 205 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-203ENST00000424270 DYNC1I2Q13409 638 aaKnown RBP5.03□□□□□ -1.6
SDCBP-203ENST00000424270 TOP3AQ13472 1001 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-203ENST00000424270 C10orf128Q5T292 105 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 KANK2Q63ZY3 851 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 PLBD1Q6P4A8 553 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 ZYG11AQ6WRX3 759 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 FBXW12Q6X9E4 464 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 RNF165Q6ZSG1 346 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 ZNF826PQ6ZT77 177 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 LHFPL4Q7Z7J7 247 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 ARMC8Q8IUR7 673 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 C10orf107Q8IVU9 208 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 OSR2Q8N2R0 312 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 SLC35F6Q8N357 371 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 LNX2Q8N448 690 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 C11orf42Q8N5U0 333 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 OR4Q3Q8NH05 313 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 OR8U1Q8NH10 309 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 SLC7A6Q92536 515 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 NABP1Q96AH0 204 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 APOBEC3DQ96AK3 386 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-203ENST00000424270 AJUBAQ96IF1 538 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 DMRTB1Q96MA1 342 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 RBP7Q96R05 134 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 P2RX4Q99571 388 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 ST6GALNAC5Q9BVH7 336 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 TUBB1Q9H4B7 451 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 KAAG1Q9UBP8 84 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 SLC25A10Q9UBX3 287 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-203ENST00000424270 ZNF391Q9UJN7 358 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 UGT2A1Q9Y4X1 527 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 DNAJC15Q9Y5T4 150 aa5.03□□□□□ -1.6
SDCBP-203ENST00000424270 FRAS1Q86XX4 4008 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 ALMS1Q8TCU4 4167 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms