RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 RGS6P49758 472 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 CXCR4P61073 352 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 GRB2P62993 217 aaKnown RBP7.96□□□□□ -1.14
PDGFC-202ENST00000422544 EFNB3Q15768 340 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 SWI5Q1ZZU3 235 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 SNAI3Q3KNW1 292 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF718Q3SXZ3 478 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 LAIR2Q6ISS4 152 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 KCTD18Q6PI47 426 aaPredicted RBP7.96□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF322Q6U7Q0 402 aaPredicted RBP7.96□□□□□ -1.14
PDGFC-202ENST00000422544 DRAM2Q6UX65 266 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 COLCA1Q6ZS62 124 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 RHOUQ7L0Q8 258 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 SSX6Q7RTT6 188 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 THAP5Q7Z6K1 395 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 KRT77Q7Z794 578 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 CDH24Q86UP0 819 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 DTX2Q86UW9 622 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF283Q8N7M2 679 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 SYNPRQ8TBG9 265 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 KLF14Q8TD94 323 aaPredicted RBP7.96□□□□□ -1.14
PDGFC-202ENST00000422544 IPCEF1Q8WWN9 437 aaPredicted RBP7.96□□□□□ -1.14
PDGFC-202ENST00000422544 IGFBPL1Q8WX77 278 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 PIGTQ969N2 578 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 APOBEC3DQ96AK3 386 aaPredicted RBP7.96□□□□□ -1.14
PDGFC-202ENST00000422544 CMBLQ96DG6 245 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 MARS2Q96GW9 593 aaKnown RBP7.96□□□□□ -1.14
PDGFC-202ENST00000422544 OR8B4Q96RC9 309 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 DOK1Q99704 481 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 C1QTNF5Q9BXJ0 243 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 OR2J1Q9GZK6 312 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 BRD7Q9NPI1 651 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 PTTG3PQ9NZH4 202 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 MYEF2Q9P2K5 600 aaKnown RBP7.96□□□□□ -1.14
PDGFC-202ENST00000422544 IKZF2Q9UKS7 526 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 EXOGQ9Y2C4 368 aaKnown RBP7.96□□□□□ -1.14
PDGFC-202ENST00000422544 RPL36Q9Y3U8 105 aaKnown RBP7.96□□□□□ -1.14
PDGFC-202ENST00000422544 FN1P02751 2386 aaKnown RBP7.95□□□□□ -1.14
PDGFC-202ENST00000422544 A0A1W2PPW3 197 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 C3orf80F5H4A9 247 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 PHYHO14832 338 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 ANXA2P07355 339 aaKnown RBP7.95□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF250P15622 560 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 GCH1P30793 250 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 CDKN1AP38936 164 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 HSPA13P48723 471 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF121P58317 390 aaPredicted RBP7.95□□□□□ -1.14
PDGFC-202ENST00000422544 SELENOVP59797 346 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 ROM1Q03395 351 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF85Q03923 595 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 HLXQ14774 488 aaPredicted RBP7.95□□□□□ -1.14
PDGFC-202ENST00000422544 SNCBQ16143 134 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 ALKBH6Q3KRA9 238 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 TMEM255AQ5JRV8 349 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 MBNL2Q5VZF2 373 aaKnown RBP7.95□□□□□ -1.14
PDGFC-202ENST00000422544 C11orf71Q6IPW1 123 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 DEGS2Q6QHC5 323 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 FAM57BQ71RH2 274 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 C1orf174Q8IYL3 243 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF679Q8IYX0 411 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 OR52I1Q8NGK6 324 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 OR5L1Q8NGL2 311 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 FBLIM1Q8WUP2 373 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 NINJ1Q92982 152 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 MROQ9BYG7 248 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 MRPS18AQ9NVS2 196 aaKnown RBP7.95□□□□□ -1.14
PDGFC-202ENST00000422544 TAAR3PQ9P1P4 343 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 MRM2Q9UI43 246 aaKnown RBP7.95□□□□□ -1.14
PDGFC-202ENST00000422544 MYRFQ9Y2G1 1151 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 LRP12Q9Y561 859 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 PCDHGB1Q9Y5G3 927 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 USF3Q68DE3 2245 aa7.95□□□□□ -1.14
PDGFC-202ENST00000422544 IGLV3-9A0A075B6K5 115 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 DAPL1A0PJW8 107 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 METTL15A6NJ78 407 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 J3QW42 95 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 OVOL3O00110 214 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 TBX1O43435 398 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF254O75437 659 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 FADS2O95864 444 aaKnown RBP7.94□□□□□ -1.14
PDGFC-202ENST00000422544 APOC1P02654 83 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 BMP4P12644 408 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 TUBG1P23258 451 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 MYF6P23409 242 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 ALDH3B1P43353 468 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 EVX1P49640 407 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 RIDAP52758 137 aaKnown RBP7.94□□□□□ -1.14
PDGFC-202ENST00000422544 KLF3P57682 345 aaPredicted RBP7.94□□□□□ -1.14
PDGFC-202ENST00000422544 SNRPD2P62316 118 aaKnown RBP7.94□□□□□ -1.14
PDGFC-202ENST00000422544 EGR3Q06889 387 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 RAB40BQ12829 278 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 MALLQ13021 153 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 PSG7Q13046 419 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 DEFB113Q30KQ7 82 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 KLHL22Q53GT1 634 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 GLYATL3Q5SZD4 288 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 PLEKHG7Q6ZR37 379 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 PRSS45Q7RTY3 260 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 LHFPL3Q86UP9 236 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 ZCCHC24Q8N2G6 241 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms