RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 NLRC3Q7RTR2 1065 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 RNF113BQ8IZP6 322 aaKnown RBP6.71□□□□□ -1.34
VIM-202ENST00000421459 OR5L1Q8NGL2 311 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 LINC01006Q8NI28 216 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 SLC7A13Q8TCU3 470 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 STON2Q8WXE9 905 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 LHX4Q969G2 390 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 APOBEC3DQ96AK3 386 aaPredicted RBP6.71□□□□□ -1.34
VIM-202ENST00000421459 RCN3Q96D15 328 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 HSH2DQ96JZ2 352 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 WDFY2Q96P53 400 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 WACQ9BTA9 647 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 FN3KQ9H479 309 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 NRIP3Q9NQ35 241 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 SAR1AQ9NR31 198 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 ADA2Q9NZK5 511 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 ARMCX1Q9P291 453 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 DNAJB11Q9UBS4 358 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 DUX4Q9UBX2 424 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 SIGLEC7Q9Y286 467 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 POLR1DQ9Y2S0 133 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 RNF114Q9Y508 228 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 DNAH3Q8TD57 4116 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 IGHV3OR15-7A0A075B7D8 119 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 IGLV1-36A0A0B4J1U3 117 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 TRBV4-1A0A0J9YWV2 114 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 A0A1B0GWJ7 208 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 A0A1W2PRD5 423 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 A0A1W2PRF3 423 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 A0A1W2PRM7 423 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 ZNF879B4DU55 563 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 IFNL4K9M1U5 179 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 CXCR6O00574 342 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 PHYHO14832 338 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 TNFRSF13BO14836 293 aaPredicted RBP6.7□□□□□ -1.34
VIM-202ENST00000421459 ADAM20O43506 726 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 ENSAO43768 121 aaKnown RBP6.7□□□□□ -1.34
VIM-202ENST00000421459 GPR137BO60478 399 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 NDUFB2O95178 105 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 NDUFA7O95182 113 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 PPP1R3DO95685 299 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 GYPAP02724 150 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 PRB2P02812 416 aaPredicted RBP6.7□□□□□ -1.34
VIM-202ENST00000421459 LCATP04180 440 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 ACSM4P0C7M7 580 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 PSKH1P11801 424 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 IRF2P14316 349 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 SDHAP31040 664 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 IFNA8P32881 189 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 RPS27P42677 84 aaKnown RBP6.7□□□□□ -1.34
VIM-202ENST00000421459 GATA4P43694 442 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 OMPP47874 163 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 RGS6P49758 472 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 LIPEQ05469 1076 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 OR8B8Q15620 311 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 KCNMB1Q16558 191 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 KRTAP27-1Q3LI81 207 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 ANKDD1AQ495B1 522 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 IFI44LQ53G44 452 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 ZNF362Q5T0B9 420 aaPredicted RBP6.7□□□□□ -1.34
VIM-202ENST00000421459 ZNF620Q6ZNG0 422 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 COLCA1Q6ZS62 124 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 FKBP9P1Q75LS8 142 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 CBLL1Q75N03 491 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 RRM2BQ7LG56 351 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 SLC15A3Q8IY34 581 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 C1orf87Q8N0U7 546 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 OR6V1Q8N148 313 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 PIP4P2Q8N4L2 257 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 FAM156AQ8NDB6 213 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 GJC3Q8NFK1 279 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 OR52J3Q8NH60 311 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 OR2AE1Q8NHA4 323 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 LZICQ8WZA0 190 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 RSRC1Q96IZ7 334 aaKnown RBP6.7□□□□□ -1.34
VIM-202ENST00000421459 COG8Q96MW5 612 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 NMNAT3Q96T66 252 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 PITX2Q99697 317 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 COQ7Q99807 217 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 HCAR1Q9BXC0 346 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 SIRPDQ9H106 197 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 MMP27Q9H306 513 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 NOX4Q9NPH5 578 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 GID8Q9NWU2 228 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 B9D1Q9UPM9 204 aa6.7□□□□□ -1.34
VIM-202ENST00000421459 IGHV1-69DA0A0B4J2H0 117 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 A0A1B0GUS0 222 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 HTR3EA5X5Y0 456 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 UNC119BA6NIH7 251 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 M0QZ24 198 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 P2RY10O00398 339 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 NME4O00746 187 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 GSTA4O15217 222 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 AHCYL1O43865 530 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 OR10H3O60404 316 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 TXNDC12O95881 172 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 NPPAP01160 153 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 IGHV1-69P01742 117 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 TFF1P04155 84 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 GRPP07492 148 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms