RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 IFNGR2P38484 337 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 GUCA1AP43080 201 aaPredicted RBP5.92□□□□□ -1.46
HMGN1-205ENST00000419378 GSSP48637 474 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 PSG4Q00888 419 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 TSPAN31Q12999 210 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 ENDOGQ14249 297 aaKnown RBP5.92□□□□□ -1.46
HMGN1-205ENST00000419378 RFX4Q33E94 735 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 DNAL1Q4LDG9 190 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF770Q6IQ21 691 aaPredicted RBP5.92□□□□□ -1.46
HMGN1-205ENST00000419378 C1orf94Q6P1W5 598 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 UGT2A3Q6UWM9 527 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF620Q6ZNG0 422 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 PTCHD4Q6ZW05 846 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 LRP11Q86VZ4 500 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 ZCCHC24Q8N2G6 241 aaKnown RBP5.92□□□□□ -1.46
HMGN1-205ENST00000419378 OR9Q2Q8NGE9 314 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 OR4C15Q8NGM1 316 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 OR1J2Q8NGS2 313 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 C10orf105Q8TEF2 133 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 POM121L2Q96KW2 1035 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 FOXN4Q96NZ1 517 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 BTBD10Q9BSF8 475 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 THTPAQ9BU02 230 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF416Q9BWM5 594 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 TRIM15Q9C019 465 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 OR2H1Q9GZK4 316 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 RAB1BQ9H0U4 201 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 WNT5BQ9H1J7 359 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 LRMDAQ9H2I8 198 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 OR52D1Q9H346 318 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 MYOZ1Q9NP98 299 aaPredicted RBP5.92□□□□□ -1.46
HMGN1-205ENST00000419378 MYEF2Q9P2K5 600 aaKnown RBP5.92□□□□□ -1.46
HMGN1-205ENST00000419378 FZR1Q9UM11 496 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 IER3IP1Q9Y5U9 82 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 SVEP1Q4LDE5 3571 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 JMJD1CQ15652 2540 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 LOC100509620A0A075B734 347 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 LOC390937A0A1W2PQ73 354 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 C5orf49A4QMS7 147 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 AQP12BA6NM10 295 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 C12orf71A8MTZ7 269 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 NDUFS8O00217 210 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 ARPC3O15145 178 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 SYNGR3O43761 229 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 SLC16A7O60669 478 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 KHDRBS3O75525 346 aaKnown RBP5.91□□□□□ -1.46
HMGN1-205ENST00000419378 CCNB2O95067 398 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 STAMBPO95630 424 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 LCKP06239 509 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 ERCC1P07992 297 aaPredicted RBP5.91□□□□□ -1.46
HMGN1-205ENST00000419378 ADRA2AP08913 450 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 DAOP14920 347 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 PCSK6P29122 969 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 APLNRP35414 380 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 WNT5AP41221 380 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 CDKN2AP42771 156 aaKnown RBP5.91□□□□□ -1.46
HMGN1-205ENST00000419378 ALDH3B1P43353 468 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 EVX1P49640 407 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 GDI2P50395 445 aaKnown RBP5.91□□□□□ -1.46
HMGN1-205ENST00000419378 PDLIM4P50479 330 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 HMGA2P52926 109 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 PCBD1P61457 104 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 ERVS71-1P61550 626 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 SCRN3Q0VDG4 424 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 PPP1R8Q12972 351 aaKnown RBP5.91□□□□□ -1.46
HMGN1-205ENST00000419378 FOXE3Q13461 319 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 BLMHQ13867 455 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 MAD2L1BPQ15013 274 aaPredicted RBP5.91□□□□□ -1.46
HMGN1-205ENST00000419378 CARTPTQ16568 116 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 FAM98BQ52LJ0 330 aaKnown RBP5.91□□□□□ -1.46
HMGN1-205ENST00000419378 OTPQ5XKR4 325 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 OR2T5Q6IEZ7 315 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF774Q6NX45 483 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 LEG1Q6P5S2 330 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 RFPL4BQ6ZWI9 263 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 RHOUQ7L0Q8 258 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 CCDC28AQ8IWP9 274 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF101Q8IZC7 436 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 LINC00471Q8N535 108 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 ICA1LQ8NDH6 482 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 OR2T29Q8NH02 315 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 GNPDA2Q8TDQ7 276 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 NEU4Q8WWR8 484 aaPredicted RBP5.91□□□□□ -1.46
HMGN1-205ENST00000419378 POP5Q969H6 163 aaKnown RBP5.91□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF503Q96F45 646 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 SAMD8Q96LT4 415 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 ERMAPQ96PL5 475 aaPredicted RBP5.91□□□□□ -1.46
HMGN1-205ENST00000419378 IFT27Q9BW83 186 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 NUAK2Q9H093 628 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 TPK1Q9H3S4 243 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 RERGLQ9H628 205 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 EGLN3Q9H6Z9 239 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 REEP1Q9H902 201 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 TBCCD1Q9NVR7 557 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 VNN3Q9NY84 501 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 SAMHD1Q9Y3Z3 626 aaKnown RBP5.91□□□□□ -1.46
HMGN1-205ENST00000419378 TIMM10BQ9Y5J6 103 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 CDH10Q9Y6N8 788 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 U3KQV3 271 aa5.91□□□□□ -1.46
HMGN1-205ENST00000419378 IGLV3-9A0A075B6K5 115 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms