RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 VWA1Q6PCB0 445 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 MYO7BQ6PIF6 2116 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 DRAM2Q6UX65 266 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 TMEM91Q6ZNR0 172 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 Q6ZT83 130 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 HIST2H3AQ71DI3 136 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 FAM57BQ71RH2 274 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 DOK3Q7L591 496 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 CCDC36Q8IYA8 594 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 ELMOD2Q8IZ81 293 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 C17orf78Q8N4C9 275 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 CISD2Q8N5K1 135 aaKnown RBP5.22□□□□□ -1.57
HMGB3-202ENST00000419110 NKAIN3Q8N8D7 197 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 IL17RDQ8NFM7 739 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 OR8B12Q8NGG6 310 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 OR52H1Q8NGJ2 320 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 OR1F12Q8NHA8 337 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 ABHD4Q8TB40 342 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 TBC1D15Q8TC07 691 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 ACOT12Q8WYK0 555 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 FBXO17Q96EF6 278 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 CPNE2Q96FN4 548 aaPredicted RBP5.22□□□□□ -1.57
HMGB3-202ENST00000419110 DCLRE1CQ96SD1 692 aaKnown RBP5.22□□□□□ -1.57
HMGB3-202ENST00000419110 SH3GL3Q99963 347 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 SLIRPQ9GZT3 109 aaKnown RBP5.22□□□□□ -1.57
HMGB3-202ENST00000419110 PBOV1Q9GZY1 135 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 RGCCQ9H4X1 137 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 PRORYQ9H606 182 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 OPA3Q9H6K4 179 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 MOV10Q9HCE1 1003 aaKnown RBP5.22□□□□□ -1.57
HMGB3-202ENST00000419110 NOX4Q9NPH5 578 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 G6PC2Q9NQR9 355 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 FRRS1LQ9P0K9 344 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF391Q9UJN7 358 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 TIMM10BQ9Y5J6 103 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 PIEZO2Q9H5I5 2752 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 ZFHX4Q86UP3 3567 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 CELSR3Q9NYQ7 3312 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 LOC400499M0QZD8 3231 aa5.21□□□□□ -1.57
HMGB3-202ENST00000419110 MGAQ8IWI9 3026 aa5.21□□□□□ -1.57
HMGB3-202ENST00000419110 A0A096LPE4 126 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 TRBV5-7A0A0A0MS05 114 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 A0A0U1RQV5 110 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 A0A1W2PPZ6 126 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 NOTOA8MTQ0 251 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 EEF1E1-BLOC1S5C9J1V9 151 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 CLDN25C9JDP6 229 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 F5H5K5 113 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 P2RY10O00398 339 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 EEF1E1O43324 174 aaKnown RBP5.21□□□□□ -1.58
HMGB3-202ENST00000419110 XRCC2O43543 280 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 SYNGR3O43761 229 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 RAD51DO75771 328 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 IL18BPO95998 194 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 PNPP00491 289 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 TTRP02766 147 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 MMP7P09237 267 aaPredicted RBP5.21□□□□□ -1.58
HMGB3-202ENST00000419110 OCMP0CE72 109 aaPredicted RBP5.21□□□□□ -1.58
HMGB3-202ENST00000419110 COX5BP10606 129 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 SLC2A1P11166 492 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 CD79AP11912 226 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 CRYGSP22914 178 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 PAX7P23759 505 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 IL32P24001 234 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 OTX1P32242 354 aaPredicted RBP5.21□□□□□ -1.58
HMGB3-202ENST00000419110 NTF4P34130 210 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 OPRM1P35372 400 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 APLNRP35414 380 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 TIMP3P35625 211 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 GNALP38405 381 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 RPS11P62280 158 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB3-202ENST00000419110 DCTN2Q13561 401 aaKnown RBP5.21□□□□□ -1.58
HMGB3-202ENST00000419110 INSL4Q14641 139 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 GSG1Q2KHT4 349 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 TBC1D28Q2M2D7 210 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 LINC00303Q3SY05 128 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 CCDC92Q53HC0 331 aaPredicted RBP5.21□□□□□ -1.58
HMGB3-202ENST00000419110 PRR30Q53SZ7 412 aaPredicted RBP5.21□□□□□ -1.58
HMGB3-202ENST00000419110 PABPC1L2AQ5JQF8 200 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 SFRP5Q5T4F7 317 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 BEND4Q6ZU67 534 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 SKA3Q8IX90 412 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 OR6Q1Q8NGQ2 317 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 AKR7LQ8NHP1 331 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 ZNF671Q8TAW3 534 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 ZFAND2BQ8WV99 257 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 AKAP1Q92667 903 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB3-202ENST00000419110 FAM71F1Q96KD3 344 aaPredicted RBP5.21□□□□□ -1.58
HMGB3-202ENST00000419110 MRI1Q9BV20 369 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 NXF2Q9GZY0 626 aaKnown RBP5.21□□□□□ -1.58
HMGB3-202ENST00000419110 WNT5BQ9H1J7 359 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 TPK1Q9H3S4 243 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 PIGMQ9H3S5 423 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 NEK6Q9HC98 313 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 OBP2BQ9NPH6 170 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 GPR84Q9NQS5 396 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 SLC17A5Q9NRA2 495 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 SH3BGRL2Q9UJC5 107 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 SLC22A13Q9Y226 551 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 AMDHD2Q9Y303 409 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms