RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 TMED6Q8WW62 240 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 AQP3Q92482 292 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 ADAT3Q96EY9 351 aaPredicted RBP13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 TPSD1Q9BZJ3 242 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 WWTR1Q9GZV5 400 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 MLXQ9UH92 298 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 POLR1DQ9Y2S0 133 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 LRP4O75096 1905 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 H7C2Y5 167 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 ATG12O94817 140 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 F12P00748 615 aaPredicted RBP13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 SLC2A1P11166 492 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 RPL35P42766 123 aaKnown RBP13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 EFNA3P52797 238 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 TMEM71Q6P5X7 295 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 ANGPTL5Q86XS5 388 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 WDFY1Q8IWB7 410 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 PAQR4Q8N4S7 273 aaPredicted RBP13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 NKAIN3Q8N8D7 197 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 OR2I1PQ8NGU4 316 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 ROBO4Q8WZ75 1007 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 TMEM41AQ96HV5 264 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 NICN1Q9BSH3 213 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 OR2S2Q9NQN1 319 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 KCNK7Q9Y2U2 307 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 A0A0A6YYH2 397 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 CPED1A4D0V7 1026 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 A6NJ64 397 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 SHISA8B8ZZ34 492 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 GABRA4P48169 554 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 SLC9A3R2Q15599 337 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 CCDC157Q569K6 752 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 DAZLQ92904 295 aaKnown RBP13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 CDCA3Q99618 268 aaPredicted RBP13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 SEC61A2Q9H9S3 476 aa13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 MYOZ1Q9NP98 299 aaPredicted RBP13.53□□□□□ -0.24
SEMA3B-203ENST00000419007 F8W036 122 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 NUDT21O43809 227 aaKnown RBP13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 OR2T1O43869 369 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 TSPAN2O60636 221 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 VSIG8P0DPA2 414 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 PSMB6P28072 239 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 GALNSP34059 522 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 NPY4RP50391 375 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 BLOC1S1P78537 153 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 TLE3Q04726 772 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 AIMP2Q13155 320 aaKnown RBP13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 C1orf100Q5SVJ3 147 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 RNF144BQ7Z419 303 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 CBLN2Q8IUK8 224 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 PUSL1Q8N0Z8 303 aaKnown RBP13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 OR4K15Q8NH41 348 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 ST7LQ8TDW4 575 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 ELP5Q8TE02 316 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 CYYR1Q96J86 154 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 TREM1Q9NP99 234 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 COLQQ9Y215 455 aaPredicted RBP13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 NPIPB7O75200 414 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 EMP2P54851 167 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 DNM1P34Q6PK57 102 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 LANCL3Q6ZV70 420 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 MMP17Q9ULZ9 603 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 MMACHCQ9Y4U1 282 aa13.52□□□□□ -0.24
SEMA3B-203ENST00000419007 TMEM218A2RU14 115 aa13.52□□□□□ -0.25
SEMA3B-203ENST00000419007 TLCD2A6NGC4 264 aa13.52□□□□□ -0.25
SEMA3B-203ENST00000419007 ABCD4O14678 606 aa13.52□□□□□ -0.25
SEMA3B-203ENST00000419007 EFSO43281 561 aa13.52□□□□□ -0.25
SEMA3B-203ENST00000419007 MPIG6BO95866 241 aa13.52□□□□□ -0.25
SEMA3B-203ENST00000419007 PTCRAQ6ISU1 281 aaPredicted RBP13.52□□□□□ -0.25
SEMA3B-203ENST00000419007 OR1M1Q8NGA1 313 aa13.52□□□□□ -0.25
SEMA3B-203ENST00000419007 OR5AP2Q8NGF4 316 aa13.52□□□□□ -0.25
SEMA3B-203ENST00000419007 PHYHIPLQ96FC7 376 aa13.52□□□□□ -0.25
SEMA3B-203ENST00000419007 FAM117AQ9C073 453 aa13.52□□□□□ -0.25
SEMA3B-203ENST00000419007 BANF2Q9H503 90 aa13.52□□□□□ -0.25
SEMA3B-203ENST00000419007 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 ZNF813Q6ZN06 617 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 FOXRED2Q8IWF2 684 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 SLC22A24Q8N4F4 322 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 OR51E1Q8TCB6 317 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 CPNE2Q96FN4 548 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 SRSF10O75494 262 aaKnown RBP13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 DCAF7P61962 342 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 SRSF3P84103 164 aaKnown RBP13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 NKAPLQ5M9Q1 402 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 SVBPQ8N300 66 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 ZDHHC22Q8N966 263 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 SLAMF6Q96DU3 332 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 PURGQ9UJV8 347 aaKnown RBP13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 PHF3Q92576 2039 aaKnown RBP13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 SPAG17Q6Q759 2223 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 OR6C76A6NM76 312 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 MS4A18H0YCH9 400 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 ADAP1O75689 374 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 TTRP02766 147 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 CRHP06850 196 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 ZNF20P17024 532 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 ZNF93P35789 620 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 MS4A18Q3C1V0 323 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 OR10R2Q8NGX6 335 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 DUSP15Q9H1R2 295 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms