RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 MPGP29372 298 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 DDOSTP39656 456 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 KIR3DL2P43630 455 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 P2RY4P51582 365 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 NANOS3P60323 173 aaKnown RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 SNTB2Q13425 540 aaKnown RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 THOC7Q6I9Y2 204 aaKnown RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 ANKRD16Q6P6B7 361 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 NUFIP2Q7Z417 695 aaKnown RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 OR56B1Q8NGI3 324 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 OR13C5Q8NGS8 318 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 WNT2BQ93097 391 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 APOBEC3DQ96AK3 386 aaPredicted RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 BORCS8Q96FH0 119 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 TRMT61AQ96FX7 289 aaKnown RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 ADGRG7Q96K78 797 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 C14orf119Q9NWQ9 140 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 PLEKHA6Q9Y2H5 1048 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 CACNG2Q9Y698 323 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 GGT3PA6NGU5 568 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 DISC1C4P0D8 188 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 GSTZ1O43708 216 aaPredicted RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 DHRS3O75911 302 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 ALDOBP05062 364 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 RFPL3SP0C7P2 107 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 ZNF93P35789 620 aaPredicted RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 CLDN18P56856 261 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 TBC1D28Q2M2D7 210 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 GGNQ86UU5 652 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 IZUMO1Q8IYV9 350 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 OR4M1Q8NGD0 313 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 OR51E1Q8TCB6 317 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 OBP2BQ9NPH6 170 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 GPR84Q9NQS5 396 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 TAS2R4Q9NYW5 299 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 SCP2D1Q9UJQ7 156 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 LOC390937A0A1W2PQ73 354 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 RPL36A-HNRNPH2H7BZ11 118 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 IFNA6P05013 189 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 TRAPPC2P0DI81 140 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 TRAPPC2BP0DI82 140 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 CDAP32320 146 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 TGIF1Q15583 401 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 ACTBL2Q562R1 376 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 FIP1L1Q6UN15 594 aaKnown RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 SNX29P2Q8IUI4 249 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 PROCRQ9UNN8 238 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 LHFPL6Q9Y693 200 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 ZNF716A6NP11 495 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 ANKRD30BLA7E2S9 258 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 MPZL1O95297 269 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 ACSM4P0C7M7 580 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 PSKH1P11801 424 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 ABOP16442 354 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 RPS27P42677 84 aaKnown RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 ARF1P84077 181 aaKnown RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 FOXK1P85037 733 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 CLN3Q13286 438 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 MEF2DQ14814 521 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 PPA1Q15181 289 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 LHFPL2Q6ZUX7 228 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 ASB5Q8WWX0 329 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 MAP6Q96JE9 813 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 METTL17Q9H7H0 456 aaPredicted RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 FAM206AQ9NX38 181 aa7.41□□□□□ -1.22
USP54-203ENST00000418501 ZNF107Q9UII5 783 aaPredicted RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 FOXD3Q9UJU5 478 aaPredicted RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 ING1Q9UK53 422 aaPredicted RBP7.41□□□□□ -1.22
USP54-203ENST00000418501 NCOR1O75376 2440 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 DCDC2BA2VCK2 349 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 RER1O15258 196 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 XRCC3O43542 346 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 WDR1O75083 606 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 ALX3O95076 343 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 GPANK1O95872 356 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 ATF1P18846 271 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 POU3F4P49335 361 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 GNG2P59768 71 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 SPOCK1Q08629 439 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 SMUG1Q53HV7 270 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 FBXW9Q5XUX1 488 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 PRSS35Q8N3Z0 413 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 POM121Q96HA1 1249 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 KLHDC3Q9BQ90 382 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 COL25A1Q9BXS0 654 aaPredicted RBP7.4□□□□□ -1.22
USP54-203ENST00000418501 METTL9Q9H1A3 318 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 V9GYH0 126 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 A0A0G2JMM0 328 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 A0A1W2PPB8 328 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 A0A1W2PRS3 328 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 KIR3DP1A8MWS1 328 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 IL2RAP01589 272 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 BTG1P62324 171 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 CLVS2Q5SYC1 327 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 GLYATL3Q5SZD4 288 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 IGFL2Q6UWQ7 119 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 IGFL3Q6UXB1 125 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 UTS2BQ765I0 119 aa7.4□□□□□ -1.22
USP54-203ENST00000418501 ZNF584Q8IVC4 421 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms