RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 OR5B3Q8NH48 314 aa10.19□□□□□ -0.78
PTCH1-205ENST00000418258 WBP2Q969T9 261 aa10.19□□□□□ -0.78
PTCH1-205ENST00000418258 PARP12Q9H0J9 701 aaKnown RBP10.19□□□□□ -0.78
PTCH1-205ENST00000418258 NHSQ6T4R5 1651 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 FITM1A5D6W6 292 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 FCER1GP30273 86 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 OR10K2Q6IF99 312 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 SLC38A9Q8NBW4 561 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 OR51S1Q8NGJ8 323 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 OLIG1Q8TAK6 271 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 TEX37Q96LM6 180 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 SLC2A8Q9NY64 477 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 TIMM9Q9Y5J7 89 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 FAM221AA4D161 298 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 GCAP28676 217 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 ZNF628Q5EBL2 1059 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 ARIH2OSQ8N7S6 290 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 S1PR5Q9H228 398 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 HES4Q9HCC6 221 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 XKRY2A2RUG3 117 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 NDUFB3O43676 98 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 OR2J3O76001 311 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 OPRM1P35372 400 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 POLR2IP36954 125 aaKnown RBP10.18□□□□□ -0.78
PTCH1-205ENST00000418258 HTR4Q13639 388 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 FAM53BQ14153 422 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 FZD2Q14332 565 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 APH1BQ8WW43 257 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 PSD2Q9BQI7 771 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 C1QTNF3Q9BXJ4 246 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 MED29Q9NX70 200 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 KCNG2Q9UJ96 466 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 LIPNQ5VXI9 398 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 PHYHIPQ92561 330 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 LRRC61Q9BV99 259 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 MED9Q9NWA0 146 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 CLCF1Q9UBD9 225 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 B3GALT5Q9Y2C3 310 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 URGCP-MRPS24S4R325 110 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 EGR3Q06889 387 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 HFEQ30201 348 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 GUSBP11Q6P575 273 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 CXorf67Q86X51 503 aaPredicted RBP10.18□□□□□ -0.78
PTCH1-205ENST00000418258 SLC7A5P1Q8MH63 180 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 WDR31Q8NA23 367 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 RPL3LQ92901 407 aaKnown RBP10.18□□□□□ -0.78
PTCH1-205ENST00000418258 AKR1E2Q96JD6 320 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 P2RX3P56373 397 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 TVP23CQ96ET8 276 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 TEAD3Q99594 435 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 C20orf27Q9GZN8 174 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 HDGFL3Q9Y3E1 203 aa10.18□□□□□ -0.78
PTCH1-205ENST00000418258 TRAV17A0A0B4J275 112 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 FRG2CA6NGY1 282 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 TMEM200CA6NKL6 621 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 ZNF121P58317 390 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-205ENST00000418258 SNRPGP62308 76 aaKnown RBP10.17□□□□□ -0.78
PTCH1-205ENST00000418258 FAM58AQ8N1B3 248 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 ST8SIA2Q92186 375 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 YIPF5Q969M3 257 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 TCEAL7Q9BRU2 100 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 PRSS37A4D1T9 235 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 BMP5P22003 454 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 TPBGQ13641 420 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 EXOSC2Q13868 293 aaKnown RBP10.17□□□□□ -0.78
PTCH1-205ENST00000418258 SYT14P1Q58G82 188 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 TMEM65Q6PI78 240 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 Q6ZS52 159 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 OR2V1Q8NHB1 315 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 SEMG1P04279 462 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 OR13C7P0DN81 318 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 EMDP50402 254 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 TMEM182Q6ZP80 229 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-205ENST00000418258 OR5M11Q96RB7 305 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 CHST6Q9GZX3 395 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 ACOT8O14734 319 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 ST8SIA5O15466 376 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 COX7A2P2O60397 106 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 TNFRSF1AP19438 455 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 RAB35Q15286 201 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 NLRP8Q86W28 1048 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 OR52N1Q8NH53 320 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 TAAR6Q96RI8 345 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 CEPT1Q9Y6K0 416 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 CDC14BO60729 498 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 ITGBL1O95965 494 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-205ENST00000418258 CYC1P08574 325 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 RFX2P48378 723 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 ZNF816Q0VGE8 651 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-205ENST00000418258 SHBQ15464 509 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 TRIP6Q15654 476 aaKnown RBP10.17□□□□□ -0.78
PTCH1-205ENST00000418258 PXT1Q8NFP0 134 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 ALKBH3Q96Q83 286 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-205ENST00000418258 ZNF251Q9BRH9 671 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 BTN1A1Q13410 526 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 FAM122CQ6P4D5 195 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 SLC36A1Q7Z2H8 476 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 ZNF391Q9UJN7 358 aa10.17□□□□□ -0.78
PTCH1-205ENST00000418258 TCRBP04435 133 aa10.16□□□□□ -0.78
PTCH1-205ENST00000418258 ATP1B1P05026 303 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms