RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 CBX1P83916 185 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 MALLQ13021 153 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 GK2Q14410 553 aaPredicted RBP13.2□□□□□ -0.3
ITGB1-204ENST00000417122 PCK2Q16822 640 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 IQCF1Q8N6M8 205 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 ZNF283Q8N7M2 679 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 BHLHE23Q8NDY6 225 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 OR10AD1Q8NGE0 317 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 OR6K6Q8NGW6 343 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 SLC30A2Q9BRI3 323 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 ZNF556Q9HAH1 456 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 DDX28Q9NUL7 540 aaKnown RBP13.2□□□□□ -0.3
ITGB1-204ENST00000417122 PPP1R3CQ9UQK1 317 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 H0YL77 283 aa13.19□□□□□ -0.3
ITGB1-204ENST00000417122 GSC2O15499 205 aa13.19□□□□□ -0.3
ITGB1-204ENST00000417122 POU1F1P28069 291 aa13.19□□□□□ -0.3
ITGB1-204ENST00000417122 RBMXP38159 391 aaKnown RBP13.19□□□□□ -0.3
ITGB1-204ENST00000417122 SLC6A9P48067 706 aa13.19□□□□□ -0.3
ITGB1-204ENST00000417122 PRSS12P56730 875 aa13.19□□□□□ -0.3
ITGB1-204ENST00000417122 TEX30Q5JUR7 227 aa13.19□□□□□ -0.3
ITGB1-204ENST00000417122 PGAP1Q75T13 922 aa13.19□□□□□ -0.3
ITGB1-204ENST00000417122 ZNF771Q7L3S4 317 aaPredicted RBP13.19□□□□□ -0.3
ITGB1-204ENST00000417122 HS3ST5Q8IZT8 346 aa13.19□□□□□ -0.3
ITGB1-204ENST00000417122 PAPD5Q8NDF8 572 aaKnown RBP13.19□□□□□ -0.3
ITGB1-204ENST00000417122 SLCO4A1Q96BD0 722 aa13.19□□□□□ -0.3
ITGB1-204ENST00000417122 COPS4Q9BT78 406 aa13.19□□□□□ -0.3
ITGB1-204ENST00000417122 CADM1Q9BY67 442 aaKnown RBP13.19□□□□□ -0.3
ITGB1-204ENST00000417122 MED20Q9H944 212 aa13.19□□□□□ -0.3
ITGB1-204ENST00000417122 CENPMQ9NSP4 180 aa13.19□□□□□ -0.3
ITGB1-204ENST00000417122 TMEM100Q9NV29 134 aa13.19□□□□□ -0.3
ITGB1-204ENST00000417122 UBAP1Q9NZ09 502 aa13.19□□□□□ -0.3
ITGB1-204ENST00000417122 FAM183AA6NL82 134 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 MLNRO43193 412 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 PLPP2O43688 288 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 IGHV2-70P01814 119 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 SBK2P0C263 348 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 OSMP13725 252 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 PRKACGP22612 351 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 OTX1P32242 354 aaPredicted RBP13.18□□□□□ -0.3
ITGB1-204ENST00000417122 SRP9P49458 86 aaKnown RBP13.18□□□□□ -0.3
ITGB1-204ENST00000417122 BNIP1Q12981 228 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 GINS1Q14691 196 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 TAF13Q15543 124 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 LINC01590Q5TEZ4 76 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 FAHD2BQ6P2I3 314 aaPredicted RBP13.18□□□□□ -0.3
ITGB1-204ENST00000417122 DRAM2Q6UX65 266 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 MRPL21Q7Z2W9 205 aaKnown RBP13.18□□□□□ -0.3
ITGB1-204ENST00000417122 TMEM158Q8WZ71 300 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 OTULINQ96BN8 352 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 SLAMF6Q96DU3 332 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 FAHD2AQ96GK7 314 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 MEGF10Q96KG7 1140 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 SIGLEC11Q96RL6 698 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 KCNJ15Q99712 375 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 GCM1Q9NP62 436 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 G6PC2Q9NQR9 355 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 DNAJB9Q9UBS3 223 aa13.18□□□□□ -0.3
ITGB1-204ENST00000417122 ZNF878C9JN71 531 aa13.17□□□□□ -0.3
ITGB1-204ENST00000417122 GLCEO94923 617 aa13.17□□□□□ -0.3
ITGB1-204ENST00000417122 PNPP00491 289 aa13.17□□□□□ -0.3
ITGB1-204ENST00000417122 HLA-DPB1P04440 258 aa13.17□□□□□ -0.3
ITGB1-204ENST00000417122 ANXA8P13928 327 aa13.17□□□□□ -0.3
ITGB1-204ENST00000417122 MMP16P51512 607 aa13.17□□□□□ -0.3
ITGB1-204ENST00000417122 BTG1P62324 171 aa13.17□□□□□ -0.3
ITGB1-204ENST00000417122 SNAI3Q3KNW1 292 aa13.17□□□□□ -0.3
ITGB1-204ENST00000417122 SPATA3Q8NHX4 192 aa13.17□□□□□ -0.3
ITGB1-204ENST00000417122 ZNF420Q8TAQ5 688 aaPredicted RBP13.17□□□□□ -0.3
ITGB1-204ENST00000417122 ST7LQ8TDW4 575 aa13.17□□□□□ -0.3
ITGB1-204ENST00000417122 SPRYD4Q8WW59 207 aaPredicted RBP13.17□□□□□ -0.3
ITGB1-204ENST00000417122 INTS14Q96SY0 518 aa13.17□□□□□ -0.3
ITGB1-204ENST00000417122 PCDHB10Q9UN67 800 aa13.17□□□□□ -0.3
ITGB1-204ENST00000417122 A0A1B0GWJ7 208 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 F5H5P2 479 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 TMEM178BH3BS89 294 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 IFNL4K9M1U5 179 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 HMGN1P05114 100 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 PAICSP22234 425 aaKnown RBP13.16□□□□□ -0.3
ITGB1-204ENST00000417122 ANOS1P23352 680 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 GSTT1P30711 240 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 RASSF2P50749 326 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 PRKXP51817 358 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 CDK5Q00535 292 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 ZNF92Q03936 586 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 EIF2B1Q14232 305 aaKnown RBP13.16□□□□□ -0.3
ITGB1-204ENST00000417122 TMEM155Q4W5P6 130 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 SPATC1Q76KD6 591 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 DPY19L4Q7Z388 723 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 LRRC28Q86X40 367 aaPredicted RBP13.16□□□□□ -0.3
ITGB1-204ENST00000417122 ERI1Q8IV48 349 aaKnown RBP13.16□□□□□ -0.3
ITGB1-204ENST00000417122 PHC2Q8IXK0 858 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 KLHL36Q8N4N3 616 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 SPICQ8N5J4 248 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 OR6N2Q8NGY6 317 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 OR2AE1Q8NHA4 323 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 OR51V1Q9H2C8 321 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 MARCH7Q9H992 704 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 METRNQ9UJH8 293 aa13.16□□□□□ -0.3
ITGB1-204ENST00000417122 FBN1P35555 2871 aaKnown RBP13.16□□□□□ -0.3
ITGB1-204ENST00000417122 A0A0G2JMP0 313 aa13.15□□□□□ -0.3
ITGB1-204ENST00000417122 IGHV3-64DA0A0J9YX35 117 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms