RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 NAA40Q86UY6 237 aa18.23■□□□□ 0.51
ACTB-203ENST00000417101 C1orf87Q8N0U7 546 aa18.23■□□□□ 0.51
ACTB-203ENST00000417101 MCUR1Q96AQ8 359 aa18.23■□□□□ 0.51
ACTB-203ENST00000417101 PLEKHA8Q96JA3 519 aa18.23■□□□□ 0.51
ACTB-203ENST00000417101 FAM107BQ9H098 131 aa18.23■□□□□ 0.51
ACTB-203ENST00000417101 CYB5R1Q9UHQ9 305 aa18.23■□□□□ 0.51
ACTB-203ENST00000417101 MAGEL2Q9UJ55 1249 aa18.23■□□□□ 0.51
ACTB-203ENST00000417101 MEGF8Q7Z7M0 2845 aa18.22■□□□□ 0.51
ACTB-203ENST00000417101 IGHV2-70DA0A0C4DH43 119 aa18.22■□□□□ 0.51
ACTB-203ENST00000417101 IDH3BO43837 385 aa18.22■□□□□ 0.51
ACTB-203ENST00000417101 GGT2P36268 569 aa18.22■□□□□ 0.51
ACTB-203ENST00000417101 IFNGR2P38484 337 aa18.22■□□□□ 0.51
ACTB-203ENST00000417101 TRAP1Q12931 704 aaKnown RBP18.22■□□□□ 0.51
ACTB-203ENST00000417101 MALLQ13021 153 aa18.22■□□□□ 0.51
ACTB-203ENST00000417101 ZNF404Q494X3 552 aa18.22■□□□□ 0.51
ACTB-203ENST00000417101 SLC35F1Q5T1Q4 408 aa18.22■□□□□ 0.51
ACTB-203ENST00000417101 LRRN1Q6UXK5 716 aa18.22■□□□□ 0.51
ACTB-203ENST00000417101 PARP8Q8N3A8 854 aa18.22■□□□□ 0.51
ACTB-203ENST00000417101 RAB40AQ8WXH6 277 aa18.22■□□□□ 0.51
ACTB-203ENST00000417101 SLCO4A1Q96BD0 722 aa18.22■□□□□ 0.51
ACTB-203ENST00000417101 ZNF747Q9BV97 191 aa18.22■□□□□ 0.51
ACTB-203ENST00000417101 ZMAT3Q9HA38 289 aaKnown RBP18.22■□□□□ 0.51
ACTB-203ENST00000417101 PNRC2Q9NPJ4 139 aaKnown RBP18.22■□□□□ 0.51
ACTB-203ENST00000417101 TMCC3Q9ULS5 477 aa18.22■□□□□ 0.51
ACTB-203ENST00000417101 FABP3P05413 133 aa18.21■□□□□ 0.51
ACTB-203ENST00000417101 HSD17B1P14061 328 aa18.21■□□□□ 0.51
ACTB-203ENST00000417101 IRF2P14316 349 aa18.21■□□□□ 0.51
ACTB-203ENST00000417101 RRM2P31350 389 aa18.21■□□□□ 0.51
ACTB-203ENST00000417101 GATA4P43694 442 aa18.21■□□□□ 0.51
ACTB-203ENST00000417101 GSSP48637 474 aa18.21■□□□□ 0.51
ACTB-203ENST00000417101 PITPNBP48739 271 aa18.21■□□□□ 0.51
ACTB-203ENST00000417101 MAB21L1Q13394 359 aa18.21■□□□□ 0.51
ACTB-203ENST00000417101 ZNF620Q6ZNG0 422 aa18.21■□□□□ 0.51
ACTB-203ENST00000417101 NLRC3Q7RTR2 1065 aa18.21■□□□□ 0.51
ACTB-203ENST00000417101 OR8B3Q8NGG8 313 aa18.21■□□□□ 0.51
ACTB-203ENST00000417101 GNPDA2Q8TDQ7 276 aa18.21■□□□□ 0.51
ACTB-203ENST00000417101 DACT3Q96B18 629 aaPredicted RBP18.21■□□□□ 0.51
ACTB-203ENST00000417101 UPRTQ96BW1 309 aa18.21■□□□□ 0.51
ACTB-203ENST00000417101 NSMCE2Q96MF7 247 aa18.21■□□□□ 0.51
ACTB-203ENST00000417101 OR8B2Q96RD0 313 aa18.21■□□□□ 0.51
ACTB-203ENST00000417101 MRPL22Q9NWU5 206 aaKnown RBP18.21■□□□□ 0.51
ACTB-203ENST00000417101 SOX21Q9Y651 276 aaPredicted RBP18.21■□□□□ 0.51
ACTB-203ENST00000417101 ARPC2O15144 300 aa18.2■□□□□ 0.5
ACTB-203ENST00000417101 FSTL3O95633 263 aa18.2■□□□□ 0.5
ACTB-203ENST00000417101 PPIAL4GP0DN37 164 aa18.2■□□□□ 0.5
ACTB-203ENST00000417101 TPTEP56180 551 aa18.2■□□□□ 0.5
ACTB-203ENST00000417101 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.2■□□□□ 0.5
ACTB-203ENST00000417101 TSPAN31Q12999 210 aa18.2■□□□□ 0.5
ACTB-203ENST00000417101 CLEC12AQ5QGZ9 265 aa18.2■□□□□ 0.5
ACTB-203ENST00000417101 LYPD2Q6UXB3 125 aa18.2■□□□□ 0.5
ACTB-203ENST00000417101 PGAP1Q75T13 922 aa18.2■□□□□ 0.5
ACTB-203ENST00000417101 C19orf18Q8NEA5 215 aa18.2■□□□□ 0.5
ACTB-203ENST00000417101 SPRYD4Q8WW59 207 aaPredicted RBP18.2■□□□□ 0.5
ACTB-203ENST00000417101 SLC25A28Q96A46 364 aa18.2■□□□□ 0.5
ACTB-203ENST00000417101 MAP6Q96JE9 813 aa18.2■□□□□ 0.5
ACTB-203ENST00000417101 NSRP1Q9H0G5 558 aaKnown RBP18.2■□□□□ 0.5
ACTB-203ENST00000417101 UFSP2Q9NUQ7 469 aa18.2■□□□□ 0.5
ACTB-203ENST00000417101 TRRAPQ9Y4A5 3859 aa18.2■□□□□ 0.5
ACTB-203ENST00000417101 KIR2DS1A0A191URI9 304 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 M0R135 149 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 FAM20BO75063 409 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 RNASE1P07998 156 aaKnown RBP18.19■□□□□ 0.5
ACTB-203ENST00000417101 PYCR1P32322 319 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 RPS27P42677 84 aaKnown RBP18.19■□□□□ 0.5
ACTB-203ENST00000417101 MTNR1AP48039 350 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 SAMD4BQ5PRF9 694 aaKnown RBP18.19■□□□□ 0.5
ACTB-203ENST00000417101 PRAMEF6Q5VXH4 476 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 PGBD2Q6P3X8 592 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 SHISA2Q6UWI4 295 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 MRPL21Q7Z2W9 205 aaKnown RBP18.19■□□□□ 0.5
ACTB-203ENST00000417101 CELF2-AS1Q8N7Q2 184 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 OR11L1Q8NGX0 322 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 Q8TCH9 128 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 ZNF799Q96GE5 643 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 CDRT15Q96T59 188 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 IL1RAPQ9NPH3 570 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 CLN8Q9UBY8 286 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 CD300AQ9UGN4 299 aa18.19■□□□□ 0.5
ACTB-203ENST00000417101 TRAV40A0A0B4J280 105 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 TMPRSS2O15393 492 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 SNX3O60493 162 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 PLATP00750 562 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 ZNF823P16415 610 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 CA6P23280 308 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 CD200P41217 278 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 SLC9A3R2Q15599 337 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 OR8G1Q15617 311 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 MPPED2Q15777 294 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 DCDC5Q6ZRR9 648 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 C9orf139Q6ZV77 190 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 ZDHHC21Q8IVQ6 265 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 PGAM4Q8N0Y7 254 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 CYB561A3Q8NBI2 242 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 PROKR2Q8NFJ6 384 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 OR10S1Q8NGN2 331 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 SPTSSAQ969W0 71 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 ERGIC1Q969X5 290 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 NUDT16L1Q9BRJ7 211 aaKnown RBP18.18■□□□□ 0.5
ACTB-203ENST00000417101 EGLN3Q9H6Z9 239 aa18.18■□□□□ 0.5
ACTB-203ENST00000417101 KCNG2Q9UJ96 466 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms