RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 OR4Q3Q8NH05 313 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 OR10J5Q8NHC4 309 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 OR5B12Q96R08 314 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 NMNAT2Q9BZQ4 307 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 LUZP4Q9P127 313 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 CT62P0C5K7 136 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 EPHA1P21709 976 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 RAB11AP62491 216 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 ATG4DQ86TL0 474 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-205ENST00000414879 ZNF546Q86UE3 836 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 TSNAXQ99598 290 aaKnown RBP10.76□□□□□ -0.69
PTPRF-205ENST00000414879 PILRBQ9UKJ0 227 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 ATP23Q9Y6H3 246 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 BHLHE40O14503 412 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 SMIM21Q3B7S5 101 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 RGS7BPQ6MZT1 257 aaPredicted RBP10.75□□□□□ -0.69
PTPRF-205ENST00000414879 LYSMD2Q8IV50 215 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 CCDC28AQ8IWP9 274 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 C1orf174Q8IYL3 243 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 FAM109AQ8N4B1 249 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 OR5D18Q8NGL1 313 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 ARSGQ96EG1 525 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 GPR173Q9NS66 373 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 SLCO1C1Q9NYB5 712 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 BTBD17A6NE02 478 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 CDK2AP1O14519 115 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 CLEC2LP0C7M8 214 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 ELK1P19419 428 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 SNCAP37840 140 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 FAM199XQ6PEV8 388 aaPredicted RBP10.75□□□□□ -0.69
PTPRF-205ENST00000414879 RDH10Q8IZV5 341 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 DNAJC5GQ8N7S2 189 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 BBS1Q8NFJ9 593 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 C10orf90Q96M02 699 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 GALNT9Q9HCQ5 603 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 AQP7P3A6NL99 342 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 K7EPK0 472 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 FOXS1O43638 330 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 HBE1P02100 147 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 APOA2P02652 100 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 PEBP1P30086 187 aaKnown RBP10.75□□□□□ -0.69
PTPRF-205ENST00000414879 MOB1BQ7L9L4 216 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 FAM71E2Q8N5Q1 922 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 BEST4Q8NFU0 473 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 ZNF436Q9C0F3 470 aaPredicted RBP10.75□□□□□ -0.69
PTPRF-205ENST00000414879 OCIAD1Q9NX40 245 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 MBD1Q9UIS9 605 aaPredicted RBP10.75□□□□□ -0.69
PTPRF-205ENST00000414879 TMA7Q9Y2S6 64 aaKnown RBP10.75□□□□□ -0.69
PTPRF-205ENST00000414879 EP400Q96L91 3159 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 PRSS44E7EML9 344 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 TO15178 435 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 IFNA17P01571 189 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 LGALS4P56470 323 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 ZNF121P58317 390 aaPredicted RBP10.75□□□□□ -0.69
PTPRF-205ENST00000414879 SLC23A3Q6PIS1 610 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 PTPMT1Q8WUK0 201 aaPredicted RBP10.75□□□□□ -0.69
PTPRF-205ENST00000414879 PLA2G12AQ9BZM1 189 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 TMEM100Q9NV29 134 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 QPCTLQ9NXS2 382 aa10.75□□□□□ -0.69
PTPRF-205ENST00000414879 LY86O95711 162 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 FABP1P07148 127 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 CSF3P09919 207 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 PPP3CBP16298 524 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 PTGS2P35354 604 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 MNX1P50219 401 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-205ENST00000414879 AKR1D1P51857 326 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 PPP1CAP62136 330 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 FABP5Q01469 135 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 ZNF266Q14584 549 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 SECTM1Q8WVN6 248 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 EDARADDQ8WWZ3 215 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 HIPK2Q9H2X6 1198 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 AMDHD2Q9Y303 409 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 EPOPA6NHQ4 379 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 SLC2A1P11166 492 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 PRKACAP17612 351 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 CSRP3P50461 194 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 FZD5Q13467 585 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 KANSL1Q7Z3B3 1105 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 OR4A16Q8NH70 328 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 ROBO4Q8WZ75 1007 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 CGGBP1Q9UFW8 167 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-205ENST00000414879 SLCO1B1Q9Y6L6 691 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 TRGV8A0A0C4DH27 118 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 H7C2Y5 167 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 DFFBO76075 338 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 EML2O95834 649 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 S100A2P29034 98 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 TRAT1Q6PIZ9 186 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 NCCRP1Q6ZVX7 275 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-205ENST00000414879 IGF2P01344 180 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 GRPP07492 148 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 ZNF136P52737 540 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 TAS2R30P59541 319 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 PEA15Q15121 130 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 NLRC3Q7RTR2 1065 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 ADPRHL1Q8NDY3 354 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 DMBX1Q8NFW5 382 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 OR10D3Q8NH80 312 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 OR2AE1Q8NHA4 323 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms