RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 KIF17Q9P2E2 1029 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 CDC42EP3Q9UKI2 254 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 WIPI2Q9Y4P8 454 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 AP4S1Q9Y587 144 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 FAM157AC9JC47 383 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 H0YL77 283 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 GLCEO94923 617 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 HMGN1P05114 100 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 ANOS1P23352 680 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 GSTT1P30711 240 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 OTX1P32242 354 aaPredicted RBP12.54□□□□□ -0.4
LIMS4-201ENST00000413601 LMO4P61968 165 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 MALLQ13021 153 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 EIF2B1Q14232 305 aaKnown RBP12.54□□□□□ -0.4
LIMS4-201ENST00000413601 TAF13Q15543 124 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 FAM120AOSQ5T036 256 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 FAHD1Q6P587 224 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 IL17RELQ6ZVW7 336 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 SPATC1Q76KD6 591 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 DPY19L4Q7Z388 723 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 CPOQ8IVL8 374 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 OR6N2Q8NGY6 317 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 ITLN1Q8WWA0 313 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 RAB1CQ92928 201 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 ZMYND19Q96E35 227 aaPredicted RBP12.54□□□□□ -0.4
LIMS4-201ENST00000413601 TIMD4Q96H15 378 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 ZNF582Q96NG8 517 aaPredicted RBP12.54□□□□□ -0.4
LIMS4-201ENST00000413601 INTS14Q96SY0 518 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 COPS4Q9BT78 406 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 SHARPINQ9H0F6 387 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 DCAF16Q9NXF7 216 aa12.54□□□□□ -0.4
LIMS4-201ENST00000413601 C5orf63A6NC05 138 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 IQCF6A8MYZ5 107 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 B4DSR2 109 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 G3V2T6 193 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 TNFRSF1AP19438 455 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 FASP25445 335 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 PRKXP51817 358 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 CRISP1P54107 249 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 SNAI3Q3KNW1 292 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 DRAM2Q6UX65 266 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 ASRGL1Q7L266 308 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 ZNF771Q7L3S4 317 aaPredicted RBP12.53□□□□□ -0.4
LIMS4-201ENST00000413601 AMIGO2Q86SJ2 522 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 BBS1Q8NFJ9 593 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 OR10AD1Q8NGE0 317 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 OR13G1Q8NGZ3 307 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 DNAJC9Q8WXX5 260 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 DUS3LQ96G46 650 aaKnown RBP12.53□□□□□ -0.4
LIMS4-201ENST00000413601 PLEKHA8Q96JA3 519 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 OR2V2Q96R30 315 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 KCNJ15Q99712 375 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 MARCH7Q9H992 704 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 LPAR2Q9HBW0 351 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 SLC25A19Q9HC21 320 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 IL19Q9UHD0 177 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 N6AMT1Q9Y5N5 214 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 ARHGAP32A7KAX9 2087 aa12.53□□□□□ -0.4
LIMS4-201ENST00000413601 ZNF878C9JN71 531 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 MLNRO43193 412 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 SELENOFO60613 162 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 MITFO75030 526 aaPredicted RBP12.52□□□□□ -0.41
LIMS4-201ENST00000413601 CIB2O75838 187 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 FAM157CP0CG43 387 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 SLC2A1P11166 492 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 SELEP16581 610 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 SLC3A1Q07837 685 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 CR1LQ2VPA4 569 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 KLHL12Q53G59 568 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 PGAP1Q75T13 922 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 MRPL21Q7Z2W9 205 aaKnown RBP12.52□□□□□ -0.41
LIMS4-201ENST00000413601 TIGD4Q8IY51 512 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 ZNF283Q8N7M2 679 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 OR2AE1Q8NHA4 323 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 LRTOMTQ8WZ04 291 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 AMELYQ99218 206 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 SLC30A2Q9BRI3 323 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 ABHD6Q9BV23 337 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 TEX12Q9BXU0 123 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 ZNF665Q9H7R5 613 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 TMEM106BQ9NUM4 274 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 TMEM100Q9NV29 134 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 TVP23BQ9NYZ1 205 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 LPAR3Q9UBY5 353 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 PPP1R3CQ9UQK1 317 aa12.52□□□□□ -0.41
LIMS4-201ENST00000413601 ANK3Q12955 4377 aaKnown RBP12.51□□□□□ -0.41
LIMS4-201ENST00000413601 IGHV3-64DA0A0J9YX35 117 aa12.51□□□□□ -0.41
LIMS4-201ENST00000413601 ISPDA4D126 451 aa12.51□□□□□ -0.41
LIMS4-201ENST00000413601 F5H5P2 479 aa12.51□□□□□ -0.41
LIMS4-201ENST00000413601 PRODHO43272 600 aa12.51□□□□□ -0.41
LIMS4-201ENST00000413601 HLA-DPB1P04440 258 aa12.51□□□□□ -0.41
LIMS4-201ENST00000413601 SLC15A1P46059 708 aa12.51□□□□□ -0.41
LIMS4-201ENST00000413601 DVL1P1P54792 670 aaPredicted RBP12.51□□□□□ -0.41
LIMS4-201ENST00000413601 RPS7P62081 194 aaKnown RBP12.51□□□□□ -0.41
LIMS4-201ENST00000413601 GRB2P62993 217 aaKnown RBP12.51□□□□□ -0.41
LIMS4-201ENST00000413601 ZNF92Q03936 586 aa12.51□□□□□ -0.41
LIMS4-201ENST00000413601 PTGES3Q15185 160 aaKnown RBP12.51□□□□□ -0.41
LIMS4-201ENST00000413601 SNAPC1Q16533 368 aa12.51□□□□□ -0.41
LIMS4-201ENST00000413601 GLYATL3Q5SZD4 288 aa12.51□□□□□ -0.41
LIMS4-201ENST00000413601 CCDC121Q6ZUS5 278 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms