RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 M0R233 179 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 ZNF254O75437 659 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 WBP4O75554 376 aaKnown RBP13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 CLIC3O95833 236 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 RAC2P15153 192 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 DCTDP32321 178 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 SLC6A9P48067 706 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 ATP5J2P56134 94 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 EGR3Q06889 387 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 PSG7Q13046 419 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 TMEM255AQ5JRV8 349 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 ZNF322Q6U7Q0 402 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 PRSS57Q6UWY2 283 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 LRRN1Q6UXK5 716 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 PRSS45Q7RTY3 260 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 ZNF679Q8IYX0 411 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 RFLNBQ8N5W9 214 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 ZNF283Q8N7M2 679 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 TFAP2CQ92754 450 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 OR8B4Q96RC9 309 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 MROQ9BYG7 248 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 SP140LQ9H930 580 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 BARX1Q9HBU1 254 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 TAAR3PQ9P1P4 343 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 ITGB1BP2Q9UKP3 347 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 LRP12Q9Y561 859 aa13.21□□□□□ -0.29
TRAPPC12-203ENST00000411973 IGHV4-39P01824 125 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 ADRA2AP08913 450 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 KITLGP21583 273 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 ATP6V1E1P36543 226 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 ALDH3B1P43353 468 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 CX3CR1P49238 355 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 MMP15P51511 669 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 CXCR4P61073 352 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 IL5RAQ01344 420 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 MALLQ13021 153 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 SNAI3Q3KNW1 292 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 SHEQ5VZ18 495 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 USP51Q70EK9 711 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 KRT77Q7Z794 578 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 KRTAP1-3Q8IUG1 177 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 CMBLQ96DG6 245 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 RNFT2Q96EX2 444 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 DYNLRB1Q9NP97 96 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 MRPS18AQ9NVS2 196 aaKnown RBP13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 CGGBP1Q9UFW8 167 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 EXOGQ9Y2C4 368 aaKnown RBP13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 VPS13CQ709C8 3753 aa13.2□□□□□ -0.3
TRAPPC12-203ENST00000411973 A0A1W2PQL4 384 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 NDUFS7O75251 213 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 APOL3O95236 402 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 F12P00748 615 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 GNAO1P09471 354 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 DBTP11182 482 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 ANOS1P23352 680 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 LIPAP38571 399 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 EFNA4P52798 201 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 AQP4P55087 323 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 ZNF121P58317 390 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 PSMA6P60900 246 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 ACTC1P68032 377 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 ACTA1P68133 377 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 ZNF91Q05481 1191 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 GK2Q14410 553 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 HLXQ14774 488 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 NKPD1Q17RQ9 610 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 ZNF684Q5T5D7 378 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 SPNS3Q6ZMD2 512 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 ZCCHC24Q8N2G6 241 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 OR10H4Q8NGA5 316 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 OR52H1Q8NGJ2 320 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 SNX33Q8WV41 574 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 LGALS12Q96DT0 336 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 SORCS2Q96PQ0 1159 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 VRK1Q99986 396 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 RAB1BQ9H0U4 201 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 CYSLTR2Q9NS75 346 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 PTTG3PQ9NZH4 202 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 PURGQ9UJV8 347 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 RPL36Q9Y3U8 105 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 PCDHGB1Q9Y5G3 927 aa13.19□□□□□ -0.3
TRAPPC12-203ENST00000411973 ACOD1A6NK06 481 aa13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 C17orf100A8MU93 164 aa13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 PSMD9O00233 223 aa13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 XRCC2O43543 280 aa13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 MT-ND5P03915 603 aa13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 ANXA2P07355 339 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 SLC2A1P11166 492 aa13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 MMP16P51512 607 aa13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 RIDAP52758 137 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 RAB40BQ12829 278 aa13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 ALKBH6Q3KRA9 238 aa13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 SSX6Q7RTT6 188 aa13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 C8orf59Q8N0T1 100 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 FBLIM1Q8WUP2 373 aa13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 NEU4Q8WWR8 484 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 SPSB4Q96A44 273 aa13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 REPIN1Q9BWE0 567 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-203ENST00000411973 OPA3Q9H6K4 179 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms