RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 SLC22A25Q6T423 547 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 FAM220AQ7Z4H9 259 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 ZNF101Q8IZC7 436 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 ZNF295-AS1Q8N0V1 137 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 OR52H1Q8NGJ2 320 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 OR5L1Q8NGL2 311 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 SPRYD4Q8WW59 207 aaPredicted RBP13.12□□□□□ -0.31
LSM5-207ENST00000410044 ITFG2Q969R8 447 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 G6PC2Q9NQR9 355 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 GNG8Q9UK08 70 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 LSM2Q9Y333 95 aaKnown RBP13.12□□□□□ -0.31
LSM5-207ENST00000410044 STARD10Q9Y365 291 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 SNX5Q9Y5X3 404 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 SPTAN1Q13813 2472 aaKnown RBP13.12□□□□□ -0.31
LSM5-207ENST00000410044 COL12A1Q99715 3063 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 PLAUP00749 431 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 LCATP04180 440 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 COL8A1P27658 744 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 CCR9P51686 369 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 GBX2P52951 348 aaPredicted RBP13.11□□□□□ -0.31
LSM5-207ENST00000410044 WNT4P56705 351 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 CCDC58Q4VC31 144 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 ZNF773Q6PK81 442 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 CATSPERDQ86XM0 798 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 SPARTQ8N0X7 666 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 RPS4Y2Q8TD47 263 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 SPSB4Q96A44 273 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 MND1Q9BWT6 205 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 ZNF442Q9H7R0 627 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 MOB1AQ9H8S9 216 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 ACOXLQ9NUZ1 547 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 ZNF319Q9P2F9 582 aa13.11□□□□□ -0.31
LSM5-207ENST00000410044 NUFIP1Q9UHK0 495 aaKnown RBP13.11□□□□□ -0.31
LSM5-207ENST00000410044 USP9YO00507 2555 aaPredicted RBP13.11□□□□□ -0.31
LSM5-207ENST00000410044 ABCA4P78363 2273 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 A0A0U1RQV5 110 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 TRIM64CA6NLI5 447 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 E7EQL1 145 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 LOC110117498-PIK3R3F6TDL0 507 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 H3BSA7 217 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 MYL12BO14950 172 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 OGG1O15527 345 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 IGLV3-1P01715 115 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 SLC6A9P48067 706 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 PPP1CBP62140 327 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 BDH1Q02338 343 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 EMX1Q04741 257 aaPredicted RBP13.1□□□□□ -0.31
LSM5-207ENST00000410044 SPHARQ15513 63 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 TBCEQ15813 527 aaPredicted RBP13.1□□□□□ -0.31
LSM5-207ENST00000410044 SNAI3Q3KNW1 292 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 ZNF704Q6ZNC4 412 aaPredicted RBP13.1□□□□□ -0.31
LSM5-207ENST00000410044 RFPL4BQ6ZWI9 263 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 ELMOD2Q8IZ81 293 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 SVOPQ8N4V2 548 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 KBTBD8Q8NFY9 601 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 OR1J1Q8NGS3 322 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 OR2G2Q8NGZ5 317 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 TMEM171Q8WVE6 324 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 GATAD2BQ8WXI9 593 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 SGK3Q96BR1 496 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 MARS2Q96GW9 593 aaKnown RBP13.1□□□□□ -0.31
LSM5-207ENST00000410044 CCDC90BQ9GZT6 254 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 PBOV1Q9GZY1 135 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 RGCCQ9H4X1 137 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 ISYNA1Q9NPH2 558 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 ACOT13Q9NPJ3 140 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 FRRS1LQ9P0K9 344 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 ZNF391Q9UJN7 358 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 OR52A1Q9UKL2 312 aa13.1□□□□□ -0.31
LSM5-207ENST00000410044 A0A1W2PPR1 153 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 C5orf63A6NC05 138 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 VSTM5A8MXK1 200 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 E9PI62 339 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 XRCC2O43543 280 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 RPP14O95059 124 aaKnown RBP13.09□□□□□ -0.31
LSM5-207ENST00000410044 LALBAP00709 142 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 TTRP02766 147 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 CD1AP06126 327 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 ANXA2P07355 339 aaKnown RBP13.09□□□□□ -0.31
LSM5-207ENST00000410044 FAM157BP0CG42 384 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 SLC2A1P11166 492 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 ZNF250P15622 560 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 PCMT1P22061 227 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 ANOS1P23352 680 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 THBS4P35443 961 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 PSMB10P40306 273 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 CDH15P55291 814 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 RPS23P62266 143 aaKnown RBP13.09□□□□□ -0.31
LSM5-207ENST00000410044 TLE4Q04727 773 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 MFGE8Q08431 387 aaPredicted RBP13.09□□□□□ -0.31
LSM5-207ENST00000410044 SNTB2Q13425 540 aaKnown RBP13.09□□□□□ -0.31
LSM5-207ENST00000410044 ALKBH1Q13686 389 aaKnown RBP13.09□□□□□ -0.31
LSM5-207ENST00000410044 ZNF672Q499Z4 452 aaPredicted RBP13.09□□□□□ -0.31
LSM5-207ENST00000410044 MBNL2Q5VZF2 373 aaKnown RBP13.09□□□□□ -0.31
LSM5-207ENST00000410044 ZNF544Q6NX49 715 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 RPL22L1Q6P5R6 122 aaKnown RBP13.09□□□□□ -0.31
LSM5-207ENST00000410044 FBXW12Q6X9E4 464 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 Q6ZSR3 168 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 FAM57BQ71RH2 274 aa13.09□□□□□ -0.31
LSM5-207ENST00000410044 OR8B12Q8NGG6 310 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms