RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 MFNGO00587 321 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 RAD51CO43502 376 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 TAS2R46P59540 309 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 SIGLEC14Q08ET2 396 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 FAM53BQ14153 422 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 MAD2L1BPQ15013 274 aaPredicted RBP1.7□□□□□ -2.14
PMS1-203ENST00000409593 NCF4Q15080 339 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 PSMD5Q16401 504 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 KLHL12Q53G59 568 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 MED27Q6P2C8 311 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 C12orf54Q6X4T0 127 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 CERS6Q6ZMG9 384 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 SGPP2Q8IWX5 399 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 FAM71AQ8IYT1 594 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 CPNE4Q96A23 557 aaPredicted RBP1.7□□□□□ -2.14
PMS1-203ENST00000409593 SAMD10Q9BYL1 202 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 NEK6Q9HC98 313 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 CSNK1G1Q9HCP0 422 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 MED4Q9NPJ6 270 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 THADAQ6YHU6 1953 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 NCBP2LA6PVI3 153 aaKnown RBP1.69□□□□□ -2.14
PMS1-203ENST00000409593 SYCE1LA8MT33 242 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 K7EMT4 169 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 KLHL2O95198 593 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 CT45A6P0DMU7 189 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 CT45A5P0DMU8 189 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 CT45A7P0DMV0 189 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 MPV17P39210 176 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 SLC1A1P43005 524 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 TNNT2P45379 298 aaPredicted RBP1.69□□□□□ -2.14
PMS1-203ENST00000409593 CT45A1Q5HYN5 189 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 HCP5Q6MZN7 132 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 PRSS54Q6PEW0 395 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 OR4M1Q8NGD0 313 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 CT45A3Q8NHU0 189 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 NUBPLQ8TB37 319 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 RAB3IL1Q8TBN0 382 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 SEC22CQ9BRL7 303 aa1.69□□□□□ -2.14
PMS1-203ENST00000409593 H7C1H1 209 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 SERPINB7O75635 380 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 NTF3P20783 257 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 IL32P24001 234 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 UBE2E1P51965 193 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 DDX39BQ13838 428 aaKnown RBP1.68□□□□□ -2.14
PMS1-203ENST00000409593 IHHQ14623 411 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 SSX2Q16385 188 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 C9orf135Q5VTT2 229 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 SLC8B1Q6J4K2 584 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 DEGS2Q6QHC5 323 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 MBOAT2Q6ZWT7 520 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 CMTM1Q8IZ96 169 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 IQCKQ8N0W5 287 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 SNX31Q8N9S9 440 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 RSPH1Q8WYR4 309 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 GPR82Q96P67 336 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 TMEM243Q9BU79 118 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 RACGAP1Q9H0H5 632 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 METTL7AQ9H8H3 244 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 AKNAQ7Z591 1439 aa1.68□□□□□ -2.14
PMS1-203ENST00000409593 A0A1B0GUH1 482 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 J3QRE1 110 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 FLOT1O75955 427 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 OR2J3O76001 311 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 SERPINE2P07093 398 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 ASGR1P07306 291 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 GALR1P47211 349 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 ART3Q13508 389 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 PNOCQ13519 176 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 DEFB134Q4QY38 66 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 NPSR1Q6W5P4 371 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 ERO1BQ86YB8 467 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 TBC1D21Q8IYX1 336 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 STK40Q8N2I9 435 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 CAPSLQ8WWF8 208 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 FBXO32Q969P5 355 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 ANKRD60Q9BZ19 345 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 CCDC59Q9P031 241 aaKnown RBP1.67□□□□□ -2.14
PMS1-203ENST00000409593 TICRRQ7Z2Z1 1910 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 BAZ2AQ9UIF9 1905 aaKnown RBP1.67□□□□□ -2.14
PMS1-203ENST00000409593 PDZK1P1A8MUH7 402 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 CLOCKO15516 846 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 CLDN11O75508 207 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 RPN2P04844 631 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 PFN1P07737 140 aaKnown RBP1.67□□□□□ -2.14
PMS1-203ENST00000409593 C1orf185Q5T7R7 199 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 CMC1Q7Z7K0 106 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 OR13C2Q8NGS9 318 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 GHSRQ92847 366 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 CENPKQ9BS16 269 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 SLC17A7Q9P2U7 560 aa1.67□□□□□ -2.14
PMS1-203ENST00000409593 XKRY2A2RUG3 117 aa1.66□□□□□ -2.14
PMS1-203ENST00000409593 TNFRSF11BO00300 401 aa1.66□□□□□ -2.14
PMS1-203ENST00000409593 SCAMP2O15127 329 aaKnown RBP1.66□□□□□ -2.14
PMS1-203ENST00000409593 GATBO75879 557 aaKnown RBP1.66□□□□□ -2.14
PMS1-203ENST00000409593 CD28P10747 220 aa1.66□□□□□ -2.14
PMS1-203ENST00000409593 HSPD1P10809 573 aaKnown RBP1.66□□□□□ -2.14
PMS1-203ENST00000409593 RRM2P31350 389 aa1.66□□□□□ -2.14
PMS1-203ENST00000409593 SLC25A35Q3KQZ1 300 aa1.66□□□□□ -2.14
PMS1-203ENST00000409593 REEP3Q6NUK4 255 aa1.66□□□□□ -2.14
PMS1-203ENST00000409593 SLC16A14Q7RTX9 510 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms