RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 DOK1Q99704 481 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 LIME1Q9H400 295 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 GRIP1Q9Y3R0 1128 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 SPEF1Q9Y4P9 236 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 CSMD1Q96PZ7 3565 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 IGHV2OR16-5A0A0B4J2B6 119 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 TMEM269A0A1B0GVZ9 245 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 ACOD1A6NK06 481 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 MAGEB4O15481 346 aaPredicted RBP14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 DBHP09172 617 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 ACSM4P0C7M7 580 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 ZNF35P13682 527 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 PCSK6P29122 969 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 MMP16P51512 607 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 RIPPLY3P57055 190 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 RSPO1Q2MKA7 263 aaPredicted RBP14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 NCMAPQ5T1S8 102 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 OR2G6Q5TZ20 316 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 C1orf174Q8IYL3 243 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 RADILQ96JH8 1075 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 C4orf45Q96LM5 186 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 COG8Q96MW5 612 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 MOB1AQ9H8S9 216 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 VCX3AQ9NNX9 186 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 TRIM36Q9NQ86 728 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 ACOXLQ9NUZ1 547 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 R4GMQ9 66 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 C2CD3Q4AC94 2353 aa14.28□□□□□ -0.12
TSPAN4-208ENST00000409531 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 A0A1W2PPR1 153 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 MAGEA13PA6NCF6 341 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 DPRXA6NFQ7 191 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 ICMTO60725 284 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 RPP14O95059 124 aaKnown RBP14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 CD3EP07766 207 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 CCL2P13500 99 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 RAD52P43351 418 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 CDH15P55291 814 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 TAS2R43P59537 309 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 BSPH1Q075Z2 132 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 SPARTQ8N0X7 666 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 OR52H1Q8NGJ2 320 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 SPRYD4Q8WW59 207 aaPredicted RBP14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 FCGR1BQ92637 280 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 APOBEC3DQ96AK3 386 aaPredicted RBP14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 PELI1Q96FA3 418 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 PLPPR2Q96GM1 343 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 ISG20L2Q9H9L3 353 aaKnown RBP14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 TBCCD1Q9NVR7 557 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 BABAM2Q9NXR7 383 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 ST6GALNAC2Q9UJ37 374 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 ITGB1BP2Q9UKP3 347 aa14.27□□□□□ -0.12
TSPAN4-208ENST00000409531 LOC110117498-PIK3R3F6TDL0 507 aa14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 ABCD4O14678 606 aa14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 LCATP04180 440 aa14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 ANXA2P07355 339 aaKnown RBP14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 TUBG1P23258 451 aa14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 LOXP28300 417 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 ZNF121P58317 390 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 BDH1Q02338 343 aa14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 EMX1Q04741 257 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 SPHARQ15513 63 aa14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 MED22Q15528 200 aa14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 CCDC58Q4VC31 144 aa14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 PIAS4Q8N2W9 510 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 OR5L1Q8NGL2 311 aa14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 GATAD2BQ8WXI9 593 aa14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 NINJ1Q92982 152 aa14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 C1QTNF5Q9BXJ0 243 aa14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 BCL2L14Q9BZR8 327 aa14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 ACOT13Q9NPJ3 140 aa14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 TUBG2Q9NRH3 451 aa14.26□□□□□ -0.13
TSPAN4-208ENST00000409531 CALCRP30988 508 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 TGM4P49221 684 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 UCP2P55851 309 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 RPS23P62266 143 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 ACSM1Q08AH1 577 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 FDX2Q6P4F2 183 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 SLC22A25Q6T423 547 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 COLCA1Q6ZS62 124 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 ZNF367Q7RTV3 350 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 KLBQ86Z14 1044 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 PAQR4Q8N4S7 273 aaPredicted RBP14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 ZNF485Q8NCK3 441 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 RORBQ92753 470 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 PGAM5Q96HS1 289 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 HS3ST6Q96QI5 342 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 BRD7Q9NPI1 651 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 FAM206AQ9NX38 181 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 NUFIP1Q9UHK0 495 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 GTF2A1LQ9UNN4 478 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 LSM2Q9Y333 95 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 RNF115Q9Y4L5 304 aa14.25□□□□□ -0.13
TSPAN4-208ENST00000409531 HRNRQ86YZ3 2850 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 PLCE1Q9P212 2302 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 XRCC2O43543 280 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 SRSF10O75494 262 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 RPSAP08865 295 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 NR4A1P22736 598 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 DNASE1P24855 282 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms