RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 COQ3Q9NZJ6 369 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 FRRS1LQ9P0K9 344 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 PROCRQ9UNN8 238 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 AK6Q9Y3D8 172 aaKnown RBP11.79□□□□□ -0.52
LIMS1-204ENST00000409441 DOCK7Q96N67 2140 aa11.79□□□□□ -0.52
LIMS1-204ENST00000409441 PHF3Q92576 2039 aaKnown RBP11.79□□□□□ -0.52
LIMS1-204ENST00000409441 A0A1W2PPK0 400 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 HMX3A6NHT5 357 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 OR4C45A6NMZ5 311 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 AIPO00170 330 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 PSMD9O00233 223 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 SLC16A7O60669 478 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 SLC43A1O75387 559 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 ZNF254O75437 659 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 RPP14O95059 124 aaKnown RBP11.78□□□□□ -0.52
LIMS1-204ENST00000409441 PAHP00439 452 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 IGHV3-9P01782 118 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 OR3A2P47893 321 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 CCR9P51686 369 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 UBE2NLQ5JXB2 153 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 KCTD18Q6PI47 426 aaPredicted RBP11.78□□□□□ -0.52
LIMS1-204ENST00000409441 PLET1Q6UQ28 207 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 HDDC2Q7Z4H3 204 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 TMEM123Q8N131 208 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 ZNF610Q8N9Z0 462 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 THEM6Q8WUY1 208 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 TRIM63Q969Q1 353 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 MRPL13Q9BYD1 178 aaKnown RBP11.78□□□□□ -0.52
LIMS1-204ENST00000409441 HDHD2Q9H0R4 259 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 BRD7Q9NPI1 651 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 ALPK2Q86TB3 2170 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 ARHGAP21Q5T5U3 1957 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 FAM240BA0A1B0GVZ2 78 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 J3QKU1 62 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 ZNF593O00488 134 aaPredicted RBP11.78□□□□□ -0.52
LIMS1-204ENST00000409441 CTDSPLO15194 276 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 CCNKO75909 580 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 IGHG1P01857 330 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 HLA-DQA2P01906 255 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 FAM157BP0CG42 384 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 CHRNB4P30926 498 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 ROM1Q03395 351 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 GLO1Q04760 184 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 MADCAM1Q13477 382 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 CARTPTQ16568 116 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 TSPO2Q5TGU0 170 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 ZNF57Q68EA5 555 aaPredicted RBP11.78□□□□□ -0.52
LIMS1-204ENST00000409441 TFAP2EQ6VUC0 442 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 C20orf196Q8IYI0 205 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 ZNF679Q8IYX0 411 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 UBE2J2Q8N2K1 259 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 OR5H6Q8NGV6 325 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 OR6N1Q8NGY5 312 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 LILRB4Q8NHJ6 448 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 ASB5Q8WWX0 329 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 C4orf45Q96LM5 186 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 THAP7Q9BT49 309 aaPredicted RBP11.78□□□□□ -0.52
LIMS1-204ENST00000409441 OPN3Q9H1Y3 402 aaPredicted RBP11.78□□□□□ -0.52
LIMS1-204ENST00000409441 MMP28Q9H239 520 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 SLCO5A1Q9H2Y9 848 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 PIGMQ9H3S5 423 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 SLC7A10Q9NS82 523 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 MRPL22Q9NWU5 206 aaKnown RBP11.78□□□□□ -0.52
LIMS1-204ENST00000409441 PRSS50Q9UI38 385 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 KCNG2Q9UJ96 466 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 V9GY05 133 aa11.78□□□□□ -0.52
LIMS1-204ENST00000409441 TRBV5-7A0A0A0MS05 114 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 OR6C65A6NJZ3 312 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 ACOD1A6NK06 481 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 IFITM5A6NNB3 132 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 ZG16O60844 167 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 KRT33AO76009 404 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 PGA4P0DJD7 388 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 PGA3P0DJD8 388 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 CALCBP10092 127 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 SNRPBP14678 240 aaKnown RBP11.77□□□□□ -0.53
LIMS1-204ENST00000409441 CTLA4P16410 223 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 HLA-DMAP28067 261 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 DDOSTP39656 456 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 MMP15P51511 669 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 SCAND1P57086 179 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 CLRN1P58418 232 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 TEX30Q5JUR7 227 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 PHYHD1Q5SRE7 291 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 FBXW9Q5XUX1 488 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 LRFN4Q6PJG9 635 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 LRRN1Q6UXK5 716 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 MRGPRGQ86SM5 289 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 ZNF676Q8N7Q3 588 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 ZNF671Q8TAW3 534 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 GPR148Q8TDV2 347 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 HSD17B8Q92506 261 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 KCNK17Q96T54 332 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 MOV10Q9HCE1 1003 aaKnown RBP11.77□□□□□ -0.53
LIMS1-204ENST00000409441 TCF7L1Q9HCS4 588 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 SLCO1C1Q9NYB5 712 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 GLTPQ9NZD2 209 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 UPB1Q9UBR1 384 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 ZNF221Q9UK13 617 aa11.77□□□□□ -0.53
LIMS1-204ENST00000409441 A8MXE2 369 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms