RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 H6PDO95479 791 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 IGLV3-27P01718 113 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 HLA-DQB2P05538 268 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 SLC2A5P22732 501 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 GATA2P23769 480 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 CRABP2P29373 138 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 PEX19P40855 299 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 RAP1GDS1P52306 607 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 DIO3P55073 304 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 RIPPLY3P57055 190 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 FBXW4P57775 412 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 CSNK1G2P78368 415 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 EGFEM1PQ0D2K5 195 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 SMARCB1Q12824 385 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 GPNMBQ14956 572 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 METTL21CQ5VZV1 264 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 SLC8B1Q6J4K2 584 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 FBXL22Q6P050 247 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 SSX9Q7RTT3 188 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 COMMD1Q8N668 190 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 SPPL2BQ8TCT7 592 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 MRAPQ8TCY5 172 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 AGR3Q8TD06 166 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 SETD7Q8WTS6 366 aaKnown RBP3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 IMP4Q96G21 291 aaKnown RBP3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 BTN2A3PQ96KV6 586 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 TECTBQ96PL2 329 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 OR8B4Q96RC9 309 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 TREX1Q9NSU2 369 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 PITPNC1Q9UKF7 332 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 FBXO5Q9UKT4 447 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 PSME2Q9UL46 239 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 C15orf41Q9Y2V0 281 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 ACOT9Q9Y305 439 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 LRRC42Q9Y546 428 aa3.52□□□□□ -1.85
HMGB3P18-201ENST00000406327 NSG1A0A0A6YYJ2 146 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 A0A0G2JRQ6 117 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 LOC285095A0A1B0GVY8 99 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 SERTM2A0A1B0GWG4 89 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 A6NIZ1 184 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 H0YC42 278 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 L7N2F9 121 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 CCL21O00585 134 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 GOSR2O14653 212 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 AGPAT2O15120 278 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 HDAC3O15379 428 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 CLOCKO15516 846 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 DFNA5O60443 496 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 ENTPD5O75356 428 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 ZDHHC11BP0C7U3 371 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 SLC35E2BP0CK96 405 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 TCN1P20061 433 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 GABRR1P24046 479 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 RFX3P48380 749 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 CD151P48509 253 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 SLC11A1P49279 550 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 RPL14P50914 215 aaKnown RBP3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 RAB9AP51151 201 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 UGT2B15P54855 530 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 ARPP19P56211 112 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 RAB10P61026 200 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 RAP1BP61224 184 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 MAXP61244 160 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 KDSRQ06136 332 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 IHHQ14623 411 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 POU6F1Q14863 301 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 CHRNA6Q15825 494 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 ATP6AP1Q15904 470 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 PSMD5Q16401 504 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 DEFB115Q30KQ5 88 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 DNAL1Q4LDG9 190 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 C9orf135Q5VTT2 229 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 EPGNQ6UW88 154 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 TMIGD1Q6UXZ0 262 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 ZNF546Q86UE3 836 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 C14orf178Q8N769 122 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 OR52I1Q8NGK6 324 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 FAM110BQ8TC76 370 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 C2orf15Q8WU43 125 aaKnown RBP3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 KCTD4Q8WVF5 259 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 STARD8Q92502 1023 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 CMTM7Q96FZ5 175 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 ITCHQ96J02 903 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 ARHGDIGQ99819 225 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 PYGO2Q9BRQ0 406 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 TMEM175Q9BSA9 504 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 DRC3Q9H069 523 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 AUNIPQ9H7T9 357 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 SLC25A22Q9H936 323 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 DDX18Q9NVP1 670 aaKnown RBP3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 KIF25Q9UIL4 384 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 CLEC4EQ9ULY5 219 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 MOKQ9UQ07 419 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 ANK1P16157 1881 aa3.51□□□□□ -1.85
HMGB3P18-201ENST00000406327 COL4A4P53420 1690 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 LOC100653049A0A140TA62 436 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 A0A1W2PQ72 361 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 FAM168BA1KXE4 195 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 AIM2O14862 343 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 ZNF780AO75290 641 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms