RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 NUFIP1Q9UHK0 495 aaKnown RBP12.36□□□□□ -0.43
PRAME-205ENST00000405655 CAMK2AQ9UQM7 478 aa12.36□□□□□ -0.43
PRAME-205ENST00000405655 RP1L1Q8IWN7 2480 aaPredicted RBP12.35□□□□□ -0.43
PRAME-205ENST00000405655 A0A096LPE4 126 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 A0A1W2PPZ6 126 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 HSPB2A8KAH6 182 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 GMDSO60547 372 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 ART1P52961 327 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 HSPB2Q16082 182 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 KCNMB1Q16558 191 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 DEFB109BQ30KR1 87 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 SNAI3Q3KNW1 292 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 TMEM69Q5SWH9 247 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 SFRP4Q6FHJ7 346 aaPredicted RBP12.35□□□□□ -0.43
PRAME-205ENST00000405655 OR2AE1Q8NHA4 323 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 ABI3Q9P2A4 366 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 SPRR3Q9UBC9 169 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 GLSO94925 669 aaPredicted RBP12.35□□□□□ -0.43
PRAME-205ENST00000405655 ISG15P05161 165 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 GDNFP39905 211 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 TAS2R20P59543 309 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 PSMA6P60900 246 aaKnown RBP12.35□□□□□ -0.43
PRAME-205ENST00000405655 RAB11BQ15907 218 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 ZNF766Q5HY98 468 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 FAM166AQ6J272 317 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 DEGS2Q6QHC5 323 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 CMBLQ96DG6 245 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 B3GNT4Q9C0J1 378 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 CNTD2Q9H8S5 307 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 RNF121Q9H920 327 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 PLEK2Q9NYT0 353 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 RHBDD3Q9Y3P4 386 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 CACNG2Q9Y698 323 aa12.35□□□□□ -0.43
PRAME-205ENST00000405655 EFSO43281 561 aa12.34□□□□□ -0.43
PRAME-205ENST00000405655 ATP6V1G1O75348 118 aa12.34□□□□□ -0.43
PRAME-205ENST00000405655 CD2P06729 351 aa12.34□□□□□ -0.43
PRAME-205ENST00000405655 GIFP27352 417 aa12.34□□□□□ -0.43
PRAME-205ENST00000405655 NR4A2P43354 598 aa12.34□□□□□ -0.43
PRAME-205ENST00000405655 AGAP6Q5VW22 663 aa12.34□□□□□ -0.43
PRAME-205ENST00000405655 ZNF704Q6ZNC4 412 aaPredicted RBP12.34□□□□□ -0.43
PRAME-205ENST00000405655 SKA3Q8IX90 412 aa12.34□□□□□ -0.43
PRAME-205ENST00000405655 S100A16Q96FQ6 103 aaKnown RBP12.34□□□□□ -0.43
PRAME-205ENST00000405655 SLC7A10Q9NS82 523 aa12.34□□□□□ -0.43
PRAME-205ENST00000405655 RCE1Q9Y256 329 aa12.34□□□□□ -0.43
PRAME-205ENST00000405655 ALG5Q9Y673 324 aa12.34□□□□□ -0.43
PRAME-205ENST00000405655 SPTBN4Q9H254 2564 aa12.34□□□□□ -0.43
PRAME-205ENST00000405655 ZNF503-AS2A6NEH8 195 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 WIPF3A6NGB9 483 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 SLC17A2O00624 439 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 CYTIPO60759 359 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 CTAG2O75638 210 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 UBCP0CG48 685 aaKnown RBP12.33□□□□□ -0.44
PRAME-205ENST00000405655 CCL2P13500 99 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 ZNF708P17019 499 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 ZNF32P17041 273 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 PTBP1P26599 531 aaKnown RBP eCLIP12.33□□□□□ -0.44
PRAME-205ENST00000405655 HTR2CP28335 458 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 DCTDP32321 178 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 MMP15P51511 669 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 TMEM244Q5VVB8 128 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 HDDC2Q7Z4H3 204 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 GPR137CQ8N3F9 429 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 TOMM5Q8N4H5 51 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 HAVCR1Q96D42 359 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 PRRX2Q99811 253 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 SLX1AQ9BQ83 275 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 GPR35Q9HC97 309 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 FLVCR2Q9UPI3 526 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 ACACAQ13085 2346 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 TRAV18A0A075B6X5 111 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 A0A1W2PP11 408 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 TGM6O95932 706 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 CALCBP10092 127 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 LIPCP11150 499 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 GUCA1AP43080 201 aaPredicted RBP12.33□□□□□ -0.44
PRAME-205ENST00000405655 TATDN3Q17R31 274 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 PLA1AQ53H76 456 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 ZNF813Q6ZN06 617 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 NUFIP2Q7Z417 695 aaKnown RBP12.33□□□□□ -0.44
PRAME-205ENST00000405655 AKAP14Q86UN6 197 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 OR5D18Q8NGL1 313 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 MS4A3Q96HJ5 214 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 PGAM5Q96HS1 289 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 SF3B5Q9BWJ5 86 aaKnown RBP12.33□□□□□ -0.44
PRAME-205ENST00000405655 ATG5Q9H1Y0 275 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 C12orf49Q9H741 205 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 EXO5Q9H790 373 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 TMEM38BQ9NVV0 291 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 CKLFQ9UBR5 152 aa12.33□□□□□ -0.44
PRAME-205ENST00000405655 MRPS18CQ9Y3D5 142 aaKnown RBP12.33□□□□□ -0.44
PRAME-205ENST00000405655 GTF3C1Q12789 2109 aa12.32□□□□□ -0.44
PRAME-205ENST00000405655 ZZEF1O43149 2961 aa12.32□□□□□ -0.44
PRAME-205ENST00000405655 A0A1B0GVI7 797 aa12.32□□□□□ -0.44
PRAME-205ENST00000405655 ZNF133P52736 654 aaPredicted RBP12.32□□□□□ -0.44
PRAME-205ENST00000405655 SOX8P57073 446 aa12.32□□□□□ -0.44
PRAME-205ENST00000405655 KLF9Q13886 244 aaPredicted RBP12.32□□□□□ -0.44
PRAME-205ENST00000405655 ZNF544Q6NX49 715 aa12.32□□□□□ -0.44
PRAME-205ENST00000405655 PLET1Q6UQ28 207 aa12.32□□□□□ -0.44
PRAME-205ENST00000405655 FOXL2NBQ6ZUU3 175 aa12.32□□□□□ -0.44
PRAME-205ENST00000405655 LYPD6Q86Y78 171 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms