RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 ISYNA1Q9NPH2 558 aa10.64□□□□□ -0.71
LINC00339-201ENST00000404210 ACOT13Q9NPJ3 140 aa10.64□□□□□ -0.71
LINC00339-201ENST00000404210 G6PC2Q9NQR9 355 aa10.64□□□□□ -0.71
LINC00339-201ENST00000404210 LSM2Q9Y333 95 aaKnown RBP10.64□□□□□ -0.71
LINC00339-201ENST00000404210 UBR5O95071 2799 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-201ENST00000404210 FAM221AA4D161 298 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 TRIM64CA6NLI5 447 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 LOC110117498-PIK3R3F6TDL0 507 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 OGG1O15527 345 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 SIAH2O43255 324 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 NGFP01138 241 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 ANXA2P07355 339 aaKnown RBP10.63□□□□□ -0.71
LINC00339-201ENST00000404210 GLRXP35754 106 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 PSMB10P40306 273 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 MAP2K4P45985 399 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 SLC6A9P48067 706 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 TAS2R43P59537 309 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 BDH1Q02338 343 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 ALKBH1Q13686 389 aaKnown RBP10.63□□□□□ -0.71
LINC00339-201ENST00000404210 RPL22L1Q6P5R6 122 aaKnown RBP10.63□□□□□ -0.71
LINC00339-201ENST00000404210 CATSPERDQ86XM0 798 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 KLBQ86Z14 1044 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 ELMOD2Q8IZ81 293 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 NUP37Q8NFH4 326 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 OR52H1Q8NGJ2 320 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 PIK3IP1Q96FE7 263 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 PGAM5Q96HS1 289 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 OR5M11Q96RB7 305 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 TMEM204Q9BSN7 226 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 PBOV1Q9GZY1 135 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 OR10A2Q9H208 303 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 MOB1AQ9H8S9 216 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 TRIM36Q9NQ86 728 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 ACOXLQ9NUZ1 547 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 FRRS1LQ9P0K9 344 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 NUFIP1Q9UHK0 495 aaKnown RBP10.63□□□□□ -0.71
LINC00339-201ENST00000404210 OR52A1Q9UKL2 312 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 STARD10Q9Y365 291 aa10.63□□□□□ -0.71
LINC00339-201ENST00000404210 DOPEY1Q5JWR5 2465 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 A6NNC1 897 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 VSTM5A8MXK1 200 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 SHISA9B4DS77 424 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 E9PI62 339 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 SMPD2O60906 423 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 CD1AP06126 327 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 RPSAP08865 295 aaKnown RBP10.62□□□□□ -0.71
LINC00339-201ENST00000404210 SLC2A1P11166 492 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 COX6B1P14854 86 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 NKX6-1P78426 367 aaPredicted RBP10.62□□□□□ -0.71
LINC00339-201ENST00000404210 GPR50Q13585 617 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 MED22Q15528 200 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 UBE2UQ5VVX9 321 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 SLC22A25Q6T423 547 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 FAM57BQ71RH2 274 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 ZNF101Q8IZC7 436 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 OR1J1Q8NGS3 322 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 OR2G2Q8NGZ5 317 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 FCGR1BQ92637 280 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 ITFG2Q969R8 447 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 PPP1R14AQ96A00 147 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 SGK3Q96BR1 496 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 BRD7Q9NPI1 651 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 ZNF319Q9P2F9 582 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 ZNF391Q9UJN7 358 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 RNF115Q9Y4L5 304 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 N6AMT1Q9Y5N5 214 aa10.62□□□□□ -0.71
LINC00339-201ENST00000404210 TRBV2A0A0J9YWF9 115 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 A0A0U1RQV5 110 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 ATP6V1G2-DDX39BF2Z307 99 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 TBX1O43435 398 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 XRCC2O43543 280 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 PLPP2O43688 288 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 ATE1O95260 518 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 LALBAP00709 142 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 LCKP06239 509 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 FAM157BP0CG42 384 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 JUNBP17275 347 aaPredicted RBP10.61□□□□□ -0.71
LINC00339-201ENST00000404210 GTF2A1P52655 376 aaPredicted RBP10.61□□□□□ -0.71
LINC00339-201ENST00000404210 NANOS3P60323 173 aaKnown RBP10.61□□□□□ -0.71
LINC00339-201ENST00000404210 PPP1CBP62140 327 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 RPS23P62266 143 aaKnown RBP10.61□□□□□ -0.71
LINC00339-201ENST00000404210 MFGE8Q08431 387 aaPredicted RBP10.61□□□□□ -0.71
LINC00339-201ENST00000404210 SPOCK1Q08629 439 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 MALLQ13021 153 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 SNAI3Q3KNW1 292 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 WDR38Q5JTN6 314 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 ADAM5Q6NVV9 412 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 ZNF704Q6ZNC4 412 aaPredicted RBP10.61□□□□□ -0.71
LINC00339-201ENST00000404210 KCTD8Q6ZWB6 473 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 ZNF367Q7RTV3 350 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 PRSS35Q8N3Z0 413 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 OR8B12Q8NGG6 310 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 ABHD4Q8TB40 342 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 RPS4Y2Q8TD47 263 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 SPSB4Q96A44 273 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 MGLLQ99685 303 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 RGCCQ9H4X1 137 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 ST6GALNAC2Q9UJ37 374 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 SLC22A13Q9Y226 551 aa10.61□□□□□ -0.71
LINC00339-201ENST00000404210 ATP23Q9Y6H3 246 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms