RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 PDZD2O15018 2839 aa25.21■■□□□ 1.63
USP42-202ENST00000404008 ANKRD17O75179 2603 aaKnown RBP25.2■■□□□ 1.63
USP42-202ENST00000404008 EFCAB10A6NFE3 127 aa25.2■■□□□ 1.63
USP42-202ENST00000404008 SLC1A7O00341 560 aa25.2■■□□□ 1.63
USP42-202ENST00000404008 KRT8P05787 483 aa25.2■■□□□ 1.63
USP42-202ENST00000404008 ADRA2AP08913 450 aa25.2■■□□□ 1.63
USP42-202ENST00000404008 SNAI3Q3KNW1 292 aa25.2■■□□□ 1.63
USP42-202ENST00000404008 DTX2Q86UW9 622 aa25.2■■□□□ 1.63
USP42-202ENST00000404008 OR5L1Q8NGL2 311 aa25.2■■□□□ 1.63
USP42-202ENST00000404008 ZNF649Q9BS31 505 aa25.2■■□□□ 1.63
USP42-202ENST00000404008 MRPL37Q9BZE1 423 aaKnown RBP25.2■■□□□ 1.63
USP42-202ENST00000404008 ERVK13-1Q9NX77 482 aa25.2■■□□□ 1.63
USP42-202ENST00000404008 FZR1Q9UM11 496 aa25.2■■□□□ 1.63
USP42-202ENST00000404008 POLQO75417 2590 aa25.2■■□□□ 1.62
USP42-202ENST00000404008 METTL15A6NJ78 407 aa25.19■■□□□ 1.62
USP42-202ENST00000404008 H3BSA7 217 aa25.19■■□□□ 1.62
USP42-202ENST00000404008 SULT1C4O75897 302 aa25.19■■□□□ 1.62
USP42-202ENST00000404008 ANXA2P07355 339 aaKnown RBP25.19■■□□□ 1.62
USP42-202ENST00000404008 DCKP27707 260 aa25.19■■□□□ 1.62
USP42-202ENST00000404008 GALEQ14376 348 aa25.19■■□□□ 1.62
USP42-202ENST00000404008 EFNB3Q15768 340 aa25.19■■□□□ 1.62
USP42-202ENST00000404008 CDONQ4KMG0 1287 aa25.19■■□□□ 1.62
USP42-202ENST00000404008 AGAP6Q5VW22 663 aa25.19■■□□□ 1.62
USP42-202ENST00000404008 PLEKHG7Q6ZR37 379 aa25.19■■□□□ 1.62
USP42-202ENST00000404008 LHFPL3Q86UP9 236 aa25.19■■□□□ 1.62
USP42-202ENST00000404008 KLF14Q8TD94 323 aaPredicted RBP25.19■■□□□ 1.62
USP42-202ENST00000404008 PLK3Q9H4B4 646 aa25.19■■□□□ 1.62
USP42-202ENST00000404008 FKBP14Q9NWM8 211 aa25.19■■□□□ 1.62
USP42-202ENST00000404008 DIMT1Q9UNQ2 313 aaKnown RBP25.19■■□□□ 1.62
USP42-202ENST00000404008 C5orf63A6NC05 138 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 CD8AP01732 235 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 ST3GAL4Q11206 333 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 MST1LQ2TV78 715 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 ZNF718Q3SXZ3 478 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 MBNL2Q5VZF2 373 aaKnown RBP25.18■■□□□ 1.62
USP42-202ENST00000404008 LRP11Q86VZ4 500 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 YIPF7Q8N8F6 280 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 SYNPRQ8TBG9 265 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 IGFBPL1Q8WX77 278 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 TMEM80Q96HE8 168 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 TRAF4Q9BUZ4 470 aaPredicted RBP25.18■■□□□ 1.62
USP42-202ENST00000404008 ALG8Q9BVK2 526 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 SP140LQ9H930 580 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 CBLN4Q9NTU7 201 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 FAM206AQ9NX38 181 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 PTTG3PQ9NZH4 202 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 LAMP3Q9UQV4 416 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 N6AMT1Q9Y5N5 214 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 AKAP6Q13023 2319 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 TMEM129A0AVI4 362 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 SRSF10O75494 262 aaKnown RBP25.18■■□□□ 1.62
USP42-202ENST00000404008 MPV17P39210 176 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 ACTA2P62736 377 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 ACTG2P63267 376 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 SWI5Q1ZZU3 235 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 TP53I3Q53FA7 332 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 C11orf71Q6IPW1 123 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 AHSA2Q719I0 299 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 FAM57BQ71RH2 274 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 SYT3Q9BQG1 590 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 BRD7Q9NPI1 651 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 UBAP1Q9NZ09 502 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 DUSP13Q9UII6 198 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 GNG8Q9UK08 70 aa25.18■■□□□ 1.62
USP42-202ENST00000404008 IGLV3-9A0A075B6K5 115 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 TMEM269A0A1B0GVZ9 245 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 B9A039 149 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 CCDC159P0C7I6 412 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 LIMS3P0CW19 117 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 LIMS4P0CW20 117 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 GCH1P30793 250 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 EVX1P49640 407 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 KLF3P57682 345 aaPredicted RBP25.17■■□□□ 1.62
USP42-202ENST00000404008 MVKQ03426 396 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 MALLQ13021 153 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 ZNF829Q3KNS6 432 aaPredicted RBP25.17■■□□□ 1.62
USP42-202ENST00000404008 LIPNQ5VXI9 398 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 KCTD20Q7Z5Y7 419 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 ZNF540Q8NDQ6 660 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 OR52H1Q8NGJ2 320 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 MRPL48Q96GC5 212 aaKnown RBP25.17■■□□□ 1.62
USP42-202ENST00000404008 MYCBPQ99417 103 aaPredicted RBP25.17■■□□□ 1.62
USP42-202ENST00000404008 CCL19Q99731 98 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 SCN3BQ9NY72 215 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 ST6GALNAC2Q9UJ37 374 aa25.17■■□□□ 1.62
USP42-202ENST00000404008 CLPTM1O96005 669 aa25.16■■□□□ 1.62
USP42-202ENST00000404008 RAF1P04049 648 aa25.16■■□□□ 1.62
USP42-202ENST00000404008 ETV1P50549 477 aa25.16■■□□□ 1.62
USP42-202ENST00000404008 MMP16P51512 607 aa25.16■■□□□ 1.62
USP42-202ENST00000404008 MFGE8Q08431 387 aaPredicted RBP25.16■■□□□ 1.62
USP42-202ENST00000404008 HLXQ14774 488 aaPredicted RBP25.16■■□□□ 1.62
USP42-202ENST00000404008 TMEM255AQ5JRV8 349 aa25.16■■□□□ 1.62
USP42-202ENST00000404008 GLYATL3Q5SZD4 288 aa25.16■■□□□ 1.62
USP42-202ENST00000404008 FBXW12Q6X9E4 464 aa25.16■■□□□ 1.62
USP42-202ENST00000404008 FAM220AQ7Z4H9 259 aa25.16■■□□□ 1.62
USP42-202ENST00000404008 ACOXLQ9NUZ1 547 aa25.16■■□□□ 1.62
USP42-202ENST00000404008 ZNF319Q9P2F9 582 aa25.16■■□□□ 1.62
USP42-202ENST00000404008 MYEF2Q9P2K5 600 aaKnown RBP25.16■■□□□ 1.62
USP42-202ENST00000404008 R4GMQ9 66 aa25.16■■□□□ 1.62
USP42-202ENST00000404008 SPG11Q96JI7 2443 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms