RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 OR1E2P47887 323 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 TAS2R41P59536 307 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 HIST1H3AP68431 136 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 AQP6Q13520 282 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 GK2Q14410 553 aaPredicted RBP9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CYP51A1Q16850 503 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 HIST2H3PS2Q5TEC6 136 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 FOXB2Q5VYV0 432 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CRIP3Q6Q6R5 217 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 ZNF826PQ6ZT77 177 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 HIST2H3AQ71DI3 136 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CCDC80Q76M96 950 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 FAM122BQ7Z309 247 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 PATL1Q86TB9 770 aaKnown RBP9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 KLHDC1Q8N7A1 406 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 PNLDC1Q8NA58 520 aaKnown RBP9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 OR13C2Q8NGS9 318 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 LRTOMTQ8WZ04 291 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 TNFRSF14Q92956 283 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 PPP1R14AQ96A00 147 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 RASD2Q96D21 266 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 BPIFA2Q96DR5 249 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CGREF1Q99674 301 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 SIRT7Q9NRC8 400 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 ADA2Q9NZK5 511 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 RPUSD1Q9UJJ7 312 aaKnown RBP9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 A4GNTQ9UNA3 340 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CORO2BQ9UQ03 480 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 COA3Q9Y2R0 106 aaPredicted RBP9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 MED31Q9Y3C7 131 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 IGHV3OR15-7A0A075B7D8 119 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 ELOVL7A1L3X0 281 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 PTBP3O95758 552 aaKnown RBP9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 MPIG6BO95866 241 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 NR2C1P13056 603 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 IFI30P13284 250 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 AMY2BP19961 511 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 MEP1BQ16820 701 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CDONQ4KMG0 1287 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 BEND6Q5SZJ8 279 aaPredicted RBP9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CORO6Q6QEF8 472 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 Q6ZTK2 550 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 DHDDSQ86SQ9 333 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CALHM3Q86XJ0 350 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 GCSAMQ8N6F7 178 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CELF2-AS1Q8N7Q2 184 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 OR10A6Q8NH74 314 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 FNDC8Q8TC99 324 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 SGCDQ92629 289 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 APOBEC3DQ96AK3 386 aaPredicted RBP9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 SEH1LQ96EE3 360 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 COG8Q96MW5 612 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 WACQ9BTA9 647 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CENPHQ9H3R5 247 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CNTD2Q9H8S5 307 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 VSX1Q9NZR4 365 aaPredicted RBP9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 KIF17Q9P2E2 1029 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 RNF7Q9UBF6 113 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 LHFPL6Q9Y693 200 aa9.72□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CSMD3Q7Z407 3707 aa9.71□□□□□ -0.85
SPTLC1P3-201ENST00000403408 TEX13CA0A0J9YWL9 993 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 PRSS37A4D1T9 235 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 OOEPA6NGQ2 149 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 A6NIZ1 184 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 J3QW42 95 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 DCTN6O00399 190 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 CDC42EP2O14613 210 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 NPFFO15130 113 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 FBP1P09467 338 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 IRF2P14316 349 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 GUCA1AP43080 201 aaPredicted RBP9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 KIR2DS4P43632 304 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 RGS6P49758 472 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SLC18A1P54219 525 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 RAP1BP61224 184 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 STX1BP61266 288 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 RAP1AP62834 184 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 VMACQ2NL98 169 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 NSUN5P1Q3KNT7 163 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 HCP5Q6MZN7 132 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 NRMQ8IXM6 262 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 GALNT4Q8N4A0 578 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 DPP10Q8N608 796 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 OR11L1Q8NGX0 322 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 WIPF2Q8TF74 440 aaPredicted RBP9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ERGIC1Q969X5 290 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 FAM96BQ9Y3D0 163 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SNX13Q9Y5W8 968 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 KPTNQ9Y664 436 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 STARD9Q9P2P6 4700 aa9.71□□□□□ -0.86
SPTLC1P3-201ENST00000403408 WI2-2373I1.2A0A1W2PRP0 233 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 FFAR1O14842 300 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SLC16A7O60669 478 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 LHBP01229 141 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ACSM4P0C7M7 580 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 CD28P10747 220 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SELLP14151 372 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 CA6P23280 308 aa9.7□□□□□ -0.86
SPTLC1P3-201ENST00000403408 KRTAP10-11P60412 298 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms