RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 ZADH2Q8N4Q0 377 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 OR10J5Q8NHC4 309 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 ANGPTL6Q8NI99 470 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 TOE1Q96GM8 510 aaKnown RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 HDAC8Q9BY41 377 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 ACTR3CQ9C0K3 210 aaPredicted RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 CMC2Q9NRP2 79 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 MN1Q10571 1320 aaPredicted RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 TMED7-TICAM2A0A0A6YYA0 188 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 SLC31A2O15432 143 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 HCRTR1O43613 425 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 CALCBP10092 127 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 RPL7P18124 248 aaKnown RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 RFC3P40938 356 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 BCL6P41182 706 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 ERHP84090 104 aaKnown RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 ZNF90Q03938 601 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 RTL8BQ17RB0 113 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 RNF151Q2KHN1 245 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 CLLU1Q5K131 121 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 TMEM81Q6P7N7 255 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 TMEM182Q6ZP80 229 aaPredicted RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 MED25Q71SY5 747 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 ZNF687Q8N1G0 1237 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 SCCPDHQ8NBX0 429 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 IL21Q9HBE4 155 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 MRPS2Q9Y399 296 aaKnown RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 TMED7Q9Y3B3 224 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 A0A1B0GUH1 482 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 H0Y8G0 127 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 SDCBPO00560 298 aaPredicted RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 TMPRSS11DO60235 418 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 EIF4E2O60573 245 aaKnown RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 CTNSO60931 367 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 YIF1AO95070 293 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 ETHE1O95571 254 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 Q1RN00 199 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 ACOT6Q3I5F7 207 aaPredicted RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 KHDC1LQ5JSQ8 128 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 C9orf152Q5JTZ5 239 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 OTPQ5XKR4 325 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 DOK3Q7L591 496 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 SIGLECL1Q8N7X8 197 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 IFT22Q9H7X7 185 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 GNB4Q9HAV0 340 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 POMT2Q9UKY4 750 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 FOCADQ5VW36 1801 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 ARPC3O15145 178 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 CXCL10P02778 98 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 SMIM17P0DL12 118 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 BIDP55957 195 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 ZNF85Q03923 595 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 FXNQ16595 210 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 DCXRQ7Z4W1 244 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 TMEM123Q8N131 208 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 OR5M1Q8NGP8 315 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 SPPL3Q8TCT6 385 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 APH1BQ8WW43 257 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 BARX1Q9HBU1 254 aaPredicted RBP8.07□□□□□ -1.12
PTPRM-202ENST00000400053 TAS2R4Q9NYW5 299 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 ASPDHA6ND91 283 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 OR4E1P0C645 316 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 LINC00303Q3SY05 128 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 TIPARPQ7Z3E1 657 aaKnown RBP8.07□□□□□ -1.12
PTPRM-202ENST00000400053 ANKRD53Q8N9V6 530 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 NUDCD2Q8WVJ2 157 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 TMEM18Q96B42 140 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 SPACA5Q96QH8 159 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 DOK1Q99704 481 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 PADI1Q9ULC6 663 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 TTC3P53804 2025 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 ANKRD31Q8N7Z5 1873 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 ABCD4O14678 606 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 XRCC3O43542 346 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 LY86O95711 162 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 PTHLHP12272 177 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 CPN1P15169 458 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 NQO2P16083 231 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 CDK5Q00535 292 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 ZNF77Q15935 545 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 CLEC12BQ2HXU8 276 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 CLEC9AQ6UXN8 241 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 FAM71CQ8NEG0 241 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 SLC24A4Q8NFF2 622 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 PPP1R1CQ8WVI7 109 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 EMG1Q92979 244 aaKnown RBP8.07□□□□□ -1.12
PTPRM-202ENST00000400053 PLEKHA2Q9HB19 425 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 ASH2LQ9UBL3 628 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 TAF1LQ8IZX4 1826 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 A0A087WV62 115 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 A0A1W2PR48 441 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 DBX1A6NMT0 343 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 PHOX2AO14813 284 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 BCAT2O15382 392 aaPredicted RBP8.07□□□□□ -1.12
PTPRM-202ENST00000400053 PNPP00491 289 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 NID1P14543 1247 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 VAMP3Q15836 100 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 C1QTNF12Q5T7M4 302 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 LHX8Q68G74 356 aa8.07□□□□□ -1.12
PTPRM-202ENST00000400053 GRINAQ7Z429 371 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms