RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 HSD17B12Q53GQ0 312 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 UNQ9370/PRO34162Q6UXP9 181 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 TRILQ7L0X0 811 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.39□□□□□ -0.27
COL25A1-201ENST00000399126 ZNF676Q8N7Q3 588 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 OR10S1Q8NGN2 331 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 RNF128Q8TEB7 428 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 ASB17Q8WXJ9 295 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 ZNF837Q96EG3 531 aaPredicted RBP13.39□□□□□ -0.27
COL25A1-201ENST00000399126 DERL3Q96Q80 235 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 CENPMQ9NSP4 180 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 LHFPL6Q9Y693 200 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 CACNA1GO43497 2377 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 GJE1A6NN92 205 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 LINC00587B1AMM8 73 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 RAB3BP20337 219 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 MEOX1P50221 254 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 CCL11P51671 97 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 FLI1Q01543 452 aaPredicted RBP13.39□□□□□ -0.27
COL25A1-201ENST00000399126 TSC22D1Q15714 1073 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 RPUSD3Q6P087 351 aaKnown RBP13.39□□□□□ -0.27
COL25A1-201ENST00000399126 KCTD18Q6PI47 426 aaPredicted RBP13.39□□□□□ -0.27
COL25A1-201ENST00000399126 OR2V1Q8NHB1 315 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 ST8SIA4Q92187 359 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 SLC7A6Q92536 515 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 DCBLD2Q96PD2 775 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 NAA11Q9BSU3 229 aaPredicted RBP13.39□□□□□ -0.27
COL25A1-201ENST00000399126 SAV1Q9H4B6 383 aaPredicted RBP13.39□□□□□ -0.27
COL25A1-201ENST00000399126 PCDHB16Q9NRJ7 776 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 ING3Q9NXR8 418 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 EMC9Q9Y3B6 208 aa13.39□□□□□ -0.27
COL25A1-201ENST00000399126 A6NIN4 97 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 ATF1P18846 271 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 ZNF273Q14593 569 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 TEX30Q5JUR7 227 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 ESPNLQ6ZVH7 1005 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 TMEM123Q8N131 208 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 OR10H5Q8NGA6 315 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 OR6N1Q8NGY5 312 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 ABHD3Q8WU67 409 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 DOCK7Q96N67 2140 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 BSNQ9UPA5 3926 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 NME2P1O60361 137 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 GATBO75879 557 aaKnown RBP13.38□□□□□ -0.27
COL25A1-201ENST00000399126 ZNF432O94892 652 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 HRGP04196 525 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 SRMP19623 302 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 NME2P22392 152 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 ANOS1P23352 680 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 CSNK1A1P48729 337 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 RIDAP52758 137 aaKnown RBP13.38□□□□□ -0.27
COL25A1-201ENST00000399126 PLGLB1Q02325 96 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 SLC25A25Q6KCM7 469 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 CNIH2Q6PI25 160 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 FAM131AQ6UXB0 335 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.38□□□□□ -0.27
COL25A1-201ENST00000399126 FDCSPQ8NFU4 85 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 YIPF5Q969M3 257 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 FYTTD1Q96QD9 318 aaKnown RBP13.38□□□□□ -0.27
COL25A1-201ENST00000399126 ASH2LQ9UBL3 628 aa13.38□□□□□ -0.27
COL25A1-201ENST00000399126 MRPS18CQ9Y3D5 142 aaKnown RBP13.38□□□□□ -0.27
COL25A1-201ENST00000399126 MAP1BP46821 2468 aaKnown RBP13.37□□□□□ -0.27
COL25A1-201ENST00000399126 NDUFS6O75380 124 aaKnown RBP13.37□□□□□ -0.27
COL25A1-201ENST00000399126 ARL6IP5O75915 188 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 AQP8O94778 261 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 HPNP05981 417 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 ARG2P78540 354 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 BTN1A1Q13410 526 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 POU4F3Q15319 338 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 P2RY14Q15391 338 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 C3AR1Q16581 482 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 BAK1Q16611 211 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 Q499Y3 187 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 RNFT1Q5M7Z0 435 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 ZNF680Q8NEM1 530 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 SLAMF6Q96DU3 332 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 SRRQ9GZT4 340 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 POLR1DQ9Y2S0 133 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 LIPGQ9Y5X9 500 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 TRAV1-2A0A0B4J238 106 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 FABP12A6NFH5 140 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 ZNF716A6NP11 495 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 SRSF10O75494 262 aaKnown RBP13.37□□□□□ -0.27
COL25A1-201ENST00000399126 VAMP5O95183 116 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 SVILO95425 2214 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 ELK1P19419 428 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 LHX2P50458 406 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 ACACAQ13085 2346 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 CLN3Q13286 438 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 HABP2Q14520 560 aaPredicted RBP13.37□□□□□ -0.27
COL25A1-201ENST00000399126 TPRA1Q86W33 373 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 ZNF433Q8N7K0 673 aaPredicted RBP13.37□□□□□ -0.27
COL25A1-201ENST00000399126 TNRC6AQ8NDV7 1962 aaKnown RBP13.37□□□□□ -0.27
COL25A1-201ENST00000399126 DNAAF1Q8NEP3 725 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 NIPAL2Q9H841 368 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 B4GALT7Q9UBV7 327 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 GDF2Q9UK05 429 aaPredicted RBP13.37□□□□□ -0.27
COL25A1-201ENST00000399126 FLVCR1Q9Y5Y0 555 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 SPTBN4Q9H254 2564 aa13.37□□□□□ -0.27
COL25A1-201ENST00000399126 TRAV8-7A0A075B6U6 113 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms