RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ATE1O95260 518 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 LCKP06239 509 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PIPP12273 146 aaPredicted RBP10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 HSD11B1P28845 292 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 RAD52P43351 418 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 FABP6P51161 128 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PRSS12P56730 875 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ZNF121P58317 390 aaPredicted RBP10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ACTC1P68032 377 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ACTA1P68133 377 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 EGR3Q06889 387 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 TAF13Q15543 124 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 EFNB3Q15768 340 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ALKBH6Q3KRA9 238 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CDONQ4KMG0 1287 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 RGS7BPQ6MZT1 257 aaPredicted RBP10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 KCTD18Q6PI47 426 aaPredicted RBP10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 C20orf204Q6ZNR8 217 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 LHFPL3Q86UP9 236 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 MUC15Q8N387 334 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ACBD7Q8N6N7 88 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 BPIFB6Q8NFQ5 453 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 KLF14Q8TD94 323 aaPredicted RBP10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 IPCEF1Q8WWN9 437 aaPredicted RBP10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 APOBEC3DQ96AK3 386 aaPredicted RBP10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SIGLEC11Q96RL6 698 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SYT3Q9BQG1 590 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PLK3Q9H4B4 646 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ERVK13-1Q9NX77 482 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PTTG3PQ9NZH4 202 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 EIF3KQ9UBQ5 218 aaKnown RBP10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 IKZF2Q9UKS7 526 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CMAHPQ9Y471 501 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SPEF1Q9Y4P9 236 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 DAPL1A0PJW8 107 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 METTL15A6NJ78 407 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 OVOL3O00110 214 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 FAM20BO75063 409 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ZNF254O75437 659 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 FADS2O95864 444 aaKnown RBP10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 LCATP04180 440 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 DCTDP32321 178 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SERPINF1P36955 418 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SLC6A9P48067 706 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ETV1P50549 477 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 RPS23P62266 143 aaKnown RBP10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ZNF92Q03936 586 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PSG7Q13046 419 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 GALEQ14376 348 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 HLXQ14774 488 aaPredicted RBP10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 TP53I3Q53FA7 332 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 KLHL22Q53GT1 634 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 GLYATL3Q5SZD4 288 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 LIPNQ5VXI9 398 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 MBNL2Q5VZF2 373 aaKnown RBP10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ARL9Q6T311 187 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 FBXW12Q6X9E4 464 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 AHSA2Q719I0 299 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 FAM57BQ71RH2 274 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 OR2AE1Q8NHA4 323 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 GTF3AQ92664 365 aaKnown RBP10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PPP1R14AQ96A00 147 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ALG8Q9BVK2 526 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 MROQ9BYG7 248 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 NIPAL2Q9H841 368 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ISG20L2Q9H9L3 353 aaKnown RBP10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 BRD7Q9NPI1 651 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ACOXLQ9NUZ1 547 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CNOT2Q9NZN8 540 aaKnown RBP10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CLEC2DQ9UHP7 191 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ST6GALNAC2Q9UJ37 374 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 DIMT1Q9UNQ2 313 aaKnown RBP10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 LAMP3Q9UQV4 416 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PLEKHA6Q9Y2H5 1048 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PCDHGB1Q9Y5G3 927 aa10.63□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CSMD1Q96PZ7 3565 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ANKRD17O75179 2603 aaKnown RBP10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 EFCAB10A6NFE3 127 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 H3BSA7 217 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SULT1C4O75897 302 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 IGLV3-1P01715 115 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CCDC159P0C7I6 412 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 DCKP27707 260 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 MMP16P51512 607 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 RIDAP52758 137 aaKnown RBP10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 OR12D2P58182 307 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ST3GAL4Q11206 333 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 TNK1Q13470 666 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 GK2Q14410 553 aaPredicted RBP10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 FBXL14Q8N1E6 418 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ZNF485Q8NCK3 441 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 OR8B12Q8NGG6 310 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SYNPRQ8TBG9 265 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 RORBQ92753 470 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SPSB4Q96A44 273 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PELI1Q96FA3 418 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 LYZL4Q96KX0 146 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 C4orf36Q96KX1 117 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SOX7Q9BT81 388 aa10.62□□□□□ -0.71
HLA-DQB1-203ENST00000399082 G6PC2Q9NQR9 355 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms