RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 GABRG1Q8N1C3 465 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 MUC20Q8N307 709 aaPredicted RBP16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SEC61A2Q9H9S3 476 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 GPR160Q9UJ42 338 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 PURGQ9UJV8 347 aaKnown RBP16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 RPH3AQ9Y2J0 694 aaPredicted RBP16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SIT1Q9Y3P8 196 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 EML6Q6ZMW3 1958 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 FREM2Q5SZK8 3169 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 CXCL2P19875 107 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 RAB13P51153 203 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 H2BFSP57053 126 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 FGL1Q08830 312 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 CARD17Q5XLA6 110 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 ADGRE4PQ86SQ3 457 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 PPP1R3BQ86XI6 285 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 OR10S1Q8NGN2 331 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 ELMOD3Q96FG2 381 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 DUSP23Q9BVJ7 150 aa16.32■□□□□ 0.2
CHRFAM7A-202ENST00000397827 PQLC2LA1A4F0 135 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 OR2M5A3KFT3 312 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 ZNF814B7Z6K7 855 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 TTRP02766 147 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 CDAP32320 146 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 GNALP38405 381 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SWI5Q1ZZU3 235 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 TMEM244Q5VVB8 128 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 ACBD4Q8NC06 268 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SAP25Q8TEE9 199 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 RNF138Q8WVD3 245 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 MRGPRX4Q96LA9 322 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 POTEKPQ9BYX7 375 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 EXO5Q9H790 373 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 FAM206AQ9NX38 181 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 UBE2QL1A1L167 161 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 OR2A4O95047 310 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 KLK2P20151 261 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 BTF3P20290 206 aaKnown RBP16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SFTPDP35247 375 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 PHF19Q5T6S3 580 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 PRAMEF20Q5VT98 475 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 GALNT16Q8N428 558 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 OR2I1PQ8NGU4 316 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 OR5B2Q96R09 309 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 OR2A7Q96R45 310 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 GSN-AS1Q9NRJ2 163 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SDHAF3Q9NRP4 125 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 RTTNQ86VV8 2226 aa16.31■□□□□ 0.2
CHRFAM7A-202ENST00000397827 ADAMTS9Q9P2N4 1935 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 PLSCR5A0PG75 271 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 TMEM235A6NFC5 223 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 NPIPB13A6NJU9 1138 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 NPIPB4C9JG80 1138 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 RAMP1O60894 148 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 PNLIPP16233 465 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 MMP16P51512 607 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 PMPCAQ10713 525 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 FAM198BQ6UWH4 519 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 MRPL13Q9BYD1 178 aaKnown RBP16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 CNTD2Q9H8S5 307 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 TMEM138Q9NPI0 162 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 BIN3Q9NQY0 253 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 MEGF11A6BM72 1044 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 LDLRAD4O15165 306 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 UBCP0CG48 685 aaKnown RBP16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 GABRA1P14867 456 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 DLX5P56178 289 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 ACTBP60709 375 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 RAP2BP61225 183 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 ACTG1P63261 375 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 RIPPLY1Q0D2K3 151 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 C4orf46Q504U0 113 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 B3GNTL1Q67FW5 361 aaPredicted RBP16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 DEGS2Q6QHC5 323 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 UEVLDQ8IX04 471 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 OR52N4Q8NGI2 321 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 FAM46BQ96A09 425 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 ADAT3Q96EY9 351 aaPredicted RBP16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 RASL10BQ96S79 203 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 PTGES2Q9H7Z7 377 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 DCAF16Q9NXF7 216 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SDK2Q58EX2 2172 aa16.3■□□□□ 0.2
CHRFAM7A-202ENST00000397827 MPTX1A8MV57 137 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 ETV2O00321 342 aaPredicted RBP16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 GOSR2O14653 212 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SNAPINO95295 136 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 RAB3DO95716 219 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 CELA2AP08217 269 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 CD37P11049 281 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 CLRN1P58418 232 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 HLA-BQ31612 363 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SFRP5Q5T4F7 317 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 DCAF12L2Q5VW00 463 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 CMBLQ96DG6 245 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 DEFB126Q9BYW3 111 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 PBOV1Q9GZY1 135 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 NDRG3Q9UGV2 375 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 A0A1W2PNV4 684 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 SYT7O43581 403 aa16.29■□□□□ 0.2
CHRFAM7A-202ENST00000397827 LAP3P28838 519 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms