RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 HRH4Q9H3N8 390 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 INPP5EQ9NRR6 644 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 TAS2R8Q9NYW2 309 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 UPB1Q9UBR1 384 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 KIF26BQ2KJY2 2108 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 RNF222A6NCQ9 220 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 H7C1Q1 480 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 MFNGO00587 321 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 BCAT2O15382 392 aaPredicted RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 HCRTR2O43614 444 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 FOXS1O43638 330 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 CDC40O60508 579 aaKnown RBP eCLIP4.51□□□□□ -1.69
SSR1-202ENST00000397511 CD74P04233 296 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 IGHV4-34P06331 123 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 SNRNP70P08621 437 aaKnown RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 CSF1P09603 554 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 RAB40ALP0C0E4 278 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 OR2T7P0C7T2 308 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 RNH1P13489 461 aaKnown RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 GRK6P43250 576 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 TNFRSF4P43489 277 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 PTH2RP49190 550 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 MEP1BQ16820 701 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 LRRC37A5PQ49AS3 106 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 ALG10Q5BKT4 473 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 ATPAF1Q5TC12 328 aaPredicted RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 MDGA2Q7Z553 956 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 BAP18Q8IXM2 172 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 OR5AP2Q8NGF4 316 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 OR2T27Q8NH04 317 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 RAB40AQ8WXH6 277 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 RGP1Q92546 391 aaPredicted RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 TSLPQ969D9 159 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 SCARF2Q96GP6 870 aaPredicted RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 VSTM2LQ96N03 204 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 LRFN5Q96NI6 719 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 NECAB3Q96P71 396 aaPredicted RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 AMELYQ99218 206 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 S100A13Q99584 98 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 SULT4A1Q9BR01 284 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 TRIM2Q9C040 744 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 LYRM4Q9HD34 91 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 CLEC1BQ9P126 229 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 ZNF230Q9UIE0 474 aaPredicted RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 GDF2Q9UK05 429 aaPredicted RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 ZNF337Q9Y3M9 751 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 ENTPD2Q9Y5L3 495 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 TRAV8-7A0A075B6U6 113 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 A0A087WV62 115 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 IGHV3-20A0A0C4DH32 117 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 IGHV5-51A0A0C4DH38 117 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 SERINC4A6NH21 518 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 SEC14L6B5MCN3 397 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 SULT2B1O00204 365 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 TNFSF14O43557 240 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 F10P00742 488 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 CSN2P05814 226 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 LIPCP11150 499 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 CDK2P24941 298 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 GSK3AP49840 483 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 NDUFA6P56556 154 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 RAB38P57729 211 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 ACTC1P68032 377 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 ACTA1P68133 377 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 GUCA2AQ02747 115 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 TNFRSF9Q07011 255 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 PCGF3Q3KNV8 242 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 SLC35D3Q5M8T2 416 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 LY6G6FQ5SQ64 297 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 FAM199XQ6PEV8 388 aaPredicted RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 DRAM2Q6UX65 266 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 UNQ6494/PRO21346Q6UXR6 183 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 ETV3LQ6ZN32 361 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 GLB1L2Q8IW92 636 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 ZNF676Q8N7Q3 588 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 C19orf47Q8N9M1 422 aaKnown RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 PLPP7Q8NBV4 271 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 OR51S1Q8NGJ8 323 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 OR4C16Q8NGL9 310 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 OR5M8Q8NGP6 311 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 LMX1AQ8TE12 382 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 NKD1Q969G9 470 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 TMEM106AQ96A25 262 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 ISOC2Q96AB3 205 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 SAT2Q96F10 170 aaPredicted RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 PIK3IP1Q96FE7 263 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 ADAM19Q9H013 955 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 SLITRK2Q9H156 845 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 NXF5Q9H1B4 397 aaKnown RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 RGCCQ9H4X1 137 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 UNKLQ9H9P5 680 aaKnown RBP4.51□□□□□ -1.69
SSR1-202ENST00000397511 NRIP3Q9NQ35 241 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 RXFP3Q9NSD7 469 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 ANKRD10Q9NXR5 420 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 FRRS1LQ9P0K9 344 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 GRHPRQ9UBQ7 328 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 CACFD1Q9UGQ2 172 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 FOXJ3Q9UPW0 622 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 THADAQ6YHU6 1953 aa4.51□□□□□ -1.69
SSR1-202ENST00000397511 CFAP47Q6ZTR5 3102 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms