RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 SLC27A4Q6P1M0 643 aa13.73□□□□□ -0.21
CLTA-203ENST00000396603 OR2T33Q8NG76 320 aa13.73□□□□□ -0.21
CLTA-203ENST00000396603 STMN2Q93045 179 aa13.73□□□□□ -0.21
CLTA-203ENST00000396603 HAVCR1Q96D42 359 aa13.73□□□□□ -0.21
CLTA-203ENST00000396603 MRI1Q9BV20 369 aa13.73□□□□□ -0.21
CLTA-203ENST00000396603 PPP1R3CQ9UQK1 317 aa13.73□□□□□ -0.21
CLTA-203ENST00000396603 LRCH1Q9Y2L9 728 aa13.73□□□□□ -0.21
CLTA-203ENST00000396603 MEGF8Q7Z7M0 2845 aa13.73□□□□□ -0.21
CLTA-203ENST00000396603 DYSFO75923 2080 aa13.73□□□□□ -0.21
CLTA-203ENST00000396603 H3BN98 237 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 WIPF1O43516 503 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 SGCEO43556 437 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 DOK2O60496 412 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 IFNGP01579 166 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 SBK2P0C263 348 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 RAC2P15153 192 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 CRABP1P29762 137 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 MDH2P40926 338 aaKnown RBP13.72□□□□□ -0.21
CLTA-203ENST00000396603 HTR5AP47898 357 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 FXYD6P3P58550 94 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 ESCO2Q56NI9 601 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 MESTQ5EB52 335 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 PYDC1Q8WXC3 89 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 PTP4A1Q93096 173 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 RASD2Q96D21 266 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 SIGLEC11Q96RL6 698 aa13.72□□□□□ -0.21
CLTA-203ENST00000396603 SOCS2O14508 198 aa13.71□□□□□ -0.21
CLTA-203ENST00000396603 RNASE1P07998 156 aaKnown RBP13.71□□□□□ -0.21
CLTA-203ENST00000396603 OSMP13725 252 aa13.71□□□□□ -0.21
CLTA-203ENST00000396603 ZNF181Q2M3W8 571 aa13.71□□□□□ -0.21
CLTA-203ENST00000396603 CLEC12AQ5QGZ9 265 aa13.71□□□□□ -0.21
CLTA-203ENST00000396603 FBXW12Q6X9E4 464 aa13.71□□□□□ -0.21
CLTA-203ENST00000396603 C9orf139Q6ZV77 190 aa13.71□□□□□ -0.21
CLTA-203ENST00000396603 VASH1Q7L8A9 365 aaPredicted RBP13.71□□□□□ -0.21
CLTA-203ENST00000396603 OR2Z1Q8NG97 314 aa13.71□□□□□ -0.21
CLTA-203ENST00000396603 OR5L1Q8NGL2 311 aa13.71□□□□□ -0.21
CLTA-203ENST00000396603 LRTOMTQ8WZ04 291 aa13.71□□□□□ -0.21
CLTA-203ENST00000396603 NIPSNAP1Q9BPW8 284 aa13.71□□□□□ -0.21
CLTA-203ENST00000396603 TSSK6Q9BXA6 273 aa13.71□□□□□ -0.21
CLTA-203ENST00000396603 EGLN3Q9H6Z9 239 aa13.71□□□□□ -0.21
CLTA-203ENST00000396603 MMP26Q9NRE1 261 aa13.71□□□□□ -0.21
CLTA-203ENST00000396603 PAPOLBQ9NRJ5 636 aaKnown RBP13.71□□□□□ -0.21
CLTA-203ENST00000396603 VSX1Q9NZR4 365 aaPredicted RBP13.71□□□□□ -0.21
CLTA-203ENST00000396603 OR5V1Q9UGF6 321 aa13.71□□□□□ -0.21
CLTA-203ENST00000396603 MGAM2Q2M2H8 2515 aa13.71□□□□□ -0.21
CLTA-203ENST00000396603 OR6C6A6NF89 314 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 POM121CA8CG34 1229 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 TRAPPC2LH3BP13 241 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 TMEM178BH3BS89 294 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 TMPRSS2O15393 492 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 KHDRBS3O75525 346 aaKnown RBP13.7□□□□□ -0.22
CLTA-203ENST00000396603 SOX14O95416 240 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 PAX8Q06710 450 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 ZMYND11Q15326 602 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 SLC36A3Q495N2 470 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 SPRNQ5BIV9 151 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 LRRN1Q6UXK5 716 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 Q6ZR03 302 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 TMEM179BQ7Z7N9 219 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 LNX2Q8N448 690 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 SIGLECL1Q8N7X8 197 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 CMBLQ96DG6 245 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 OR2V2Q96R30 315 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 PRRG3Q9BZD7 231 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 SYT4Q9H2B2 425 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 PPIAL4AQ9Y536 164 aa13.7□□□□□ -0.22
CLTA-203ENST00000396603 RIIAD1A6NNX1 92 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 BHLHE40O14503 412 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 HMGN1P05114 100 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 SCG5P05408 212 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 HIST1H1CP16403 213 aaKnown RBP13.69□□□□□ -0.22
CLTA-203ENST00000396603 ZNF3P17036 446 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 MTNR1AP48039 350 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 IL13RA1P78552 427 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 KCNMB1Q16558 191 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 KLF17Q5JT82 389 aaPredicted RBP13.69□□□□□ -0.22
CLTA-203ENST00000396603 FAHD1Q6P587 224 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 LEG1Q6P5S2 330 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 AMIGO2Q86SJ2 522 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 GLB1L2Q8IW92 636 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 PARP8Q8N3A8 854 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 OR13G1Q8NGZ3 307 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 OR4K13Q8NH42 304 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 ITLN1Q8WWA0 313 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 C22orf15Q8WYQ4 148 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 SLC25A28Q96A46 364 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 GABARAPL1Q9H0R8 117 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 S100A14Q9HCY8 104 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 GCM1Q9NP62 436 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 EMC7Q9NPA0 242 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 DCAF16Q9NXF7 216 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 ZNF69Q9UC07 566 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 STARD10Q9Y365 291 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 ORC6Q9Y5N6 252 aa13.69□□□□□ -0.22
CLTA-203ENST00000396603 A0A1B0GWJ7 208 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 DNAJC9-AS1A6NH13 148 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 H7C1C5 153 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 SLC16A7O60669 478 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 CTLA4P16410 223 aa13.68□□□□□ -0.22
CLTA-203ENST00000396603 PAICSP22234 425 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms