RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 FAM57BQ71RH2 274 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 UTS2BQ765I0 119 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 SLC22A24Q8N4F4 322 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 OR2M7Q8NG81 312 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 OR10D3Q8NH80 312 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 PTX4Q96A99 478 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 METTL17Q9H7H0 456 aaPredicted RBP13.19□□□□□ -0.3
CBX3-202ENST00000396386 A0A0A6YYH2 397 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 A6NJ64 397 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 ZNF716A6NP11 495 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 LINC01387J3KSC0 135 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 PEX14O75381 377 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 RAB6AP20340 208 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 PSMB1P20618 241 aaKnown RBP13.19□□□□□ -0.3
CBX3-202ENST00000396386 CCL1P22362 96 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 CTSSP25774 331 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 PRSS3P35030 304 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 GFRA1P56159 465 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 MRPS34P82930 218 aaKnown RBP13.19□□□□□ -0.3
CBX3-202ENST00000396386 AIMP2Q13155 320 aaKnown RBP13.19□□□□□ -0.3
CBX3-202ENST00000396386 GSG1Q2KHT4 349 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 PCGF3Q3KNV8 242 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 SFRP4Q6FHJ7 346 aaPredicted RBP13.19□□□□□ -0.3
CBX3-202ENST00000396386 ZNF529Q6P280 563 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 DOK3Q7L591 496 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 OR4D6Q8NGJ1 314 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 OR13C9Q8NGT0 318 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 SLC39A7Q92504 469 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 UQCC2Q9BRT2 126 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 B3GNT4Q9C0J1 378 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 OR51J1Q9H342 316 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 ZNF703Q9H7S9 590 aaPredicted RBP13.19□□□□□ -0.3
CBX3-202ENST00000396386 GPR84Q9NQS5 396 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 EMC3Q9P0I2 261 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 ALDOBP05062 364 aa13.18□□□□□ -0.3
CBX3-202ENST00000396386 STARP49675 285 aa13.18□□□□□ -0.3
CBX3-202ENST00000396386 HIST1H3AP68431 136 aa13.18□□□□□ -0.3
CBX3-202ENST00000396386 SSBP1Q04837 148 aaKnown RBP13.18□□□□□ -0.3
CBX3-202ENST00000396386 TRIP6Q15654 476 aaKnown RBP13.18□□□□□ -0.3
CBX3-202ENST00000396386 PDSS1Q5T2R2 415 aa13.18□□□□□ -0.3
CBX3-202ENST00000396386 HIST2H3PS2Q5TEC6 136 aa13.18□□□□□ -0.3
CBX3-202ENST00000396386 CD276Q5ZPR3 534 aa13.18□□□□□ -0.3
CBX3-202ENST00000396386 NCCRP1Q6ZVX7 275 aaPredicted RBP13.18□□□□□ -0.3
CBX3-202ENST00000396386 HIST2H3AQ71DI3 136 aa13.18□□□□□ -0.3
CBX3-202ENST00000396386 FGD2Q7Z6J4 655 aa13.18□□□□□ -0.3
CBX3-202ENST00000396386 CPNE4Q96A23 557 aaPredicted RBP13.18□□□□□ -0.3
CBX3-202ENST00000396386 DACT3Q96B18 629 aaPredicted RBP13.18□□□□□ -0.3
CBX3-202ENST00000396386 PGAM5Q96HS1 289 aa13.18□□□□□ -0.3
CBX3-202ENST00000396386 SIGLEC12Q96PQ1 595 aa13.18□□□□□ -0.3
CBX3-202ENST00000396386 CNTD2Q9H8S5 307 aa13.18□□□□□ -0.3
CBX3-202ENST00000396386 PRAF2O60831 178 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 BPNT1O95861 308 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 C1QBP02746 253 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 ACTBP60709 375 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 ACTG1P63261 375 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 GALK2Q01415 458 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 GUCA2AQ02747 115 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 FCN2Q15485 313 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 OR1C1Q15619 314 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 PGAP1Q75T13 922 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 ZNF627Q7L945 461 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 LRRC18Q8N456 261 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 SUMF1Q8NBK3 374 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 OR52N4Q8NGI2 321 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 ROBO4Q8WZ75 1007 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 FAM71F1Q96KD3 344 aaPredicted RBP13.17□□□□□ -0.3
CBX3-202ENST00000396386 TP63Q9H3D4 680 aaPredicted RBP13.17□□□□□ -0.3
CBX3-202ENST00000396386 NKIRAS2Q9NYR9 191 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 IL17BQ9UHF5 180 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 GPR179Q6PRD1 2367 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 FRYLO94915 3013 aa13.17□□□□□ -0.3
CBX3-202ENST00000396386 OR5H15A6NDH6 313 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 SULT1C2O00338 296 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 PMPCAQ10713 525 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 GFOD2Q3B7J2 385 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 SLC25A25Q6KCM7 469 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 FAAP20Q6NZ36 180 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 AAED1Q7RTV5 226 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 GLRX5Q86SX6 157 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 LIX1LQ8IVB5 337 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 FER1L6-AS2Q96M78 137 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 TRAF4Q9BUZ4 470 aaPredicted RBP13.16□□□□□ -0.3
CBX3-202ENST00000396386 SCPEP1Q9HB40 452 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 ZNF319Q9P2F9 582 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 RAB22AQ9UL26 194 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 SLC5A6Q9Y289 635 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 CYTIPO60759 359 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 APOC1P02654 83 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 HPNP05981 417 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 LPLP06858 475 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 SDHBP21912 280 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 ERP29P30040 261 aaKnown RBP13.16□□□□□ -0.3
CBX3-202ENST00000396386 SLC6A9P48067 706 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 IFITM2Q01629 132 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 LINC00303Q3SY05 128 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 CCDC92Q53HC0 331 aaPredicted RBP13.16□□□□□ -0.3
CBX3-202ENST00000396386 FAM27BQ5VT28 67 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 PIP4P1Q86T03 277 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 GPR137CQ8N3F9 429 aa13.16□□□□□ -0.3
CBX3-202ENST00000396386 IL22RA1Q8N6P7 574 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms