RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 HTR3DQ70Z44 454 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 UBE3DQ7Z6J8 389 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 APCDD1LQ8NCL9 501 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 UBTD2Q8WUN7 234 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 REEP6Q96HR9 211 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 SLC41A2Q96JW4 573 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 CKAP5Q14008 2032 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 KCNE1BA0A087WTH5 132 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 TMEM129A0AVI4 362 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 RBMXL2O75526 392 aaKnown RBP7.63□□□□□ -1.19
NDE1-202ENST00000396355 MT-CO2P00403 227 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 CATP04040 527 aaKnown RBP7.63□□□□□ -1.19
NDE1-202ENST00000396355 ITGB2P05107 769 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 C1SP09871 688 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 NDUFV2P19404 249 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 MST1P26927 711 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 AK4P27144 223 aaPredicted RBP7.63□□□□□ -1.19
NDE1-202ENST00000396355 P2RX1P51575 399 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 LSM11P83369 360 aaKnown RBP eCLIP7.63□□□□□ -1.19
NDE1-202ENST00000396355 MLF2Q15773 248 aaPredicted RBP7.63□□□□□ -1.19
NDE1-202ENST00000396355 EXT1Q16394 746 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 ZNF429Q86V71 674 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 LMNTD1Q8N9Z9 388 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 ZFP62Q8NB50 900 aaPredicted RBP7.63□□□□□ -1.19
NDE1-202ENST00000396355 OR13D1Q8NGV5 346 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 METTL21AQ8WXB1 218 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 OVCA2Q8WZ82 227 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 MCHR1Q99705 422 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 TAPBPLQ9BX59 468 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 LMAN1LQ9HAT1 526 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 PIPOXQ9P0Z9 390 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 LPAR3Q9UBY5 353 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 MED31Q9Y3C7 131 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 METTL12A8MUP2 240 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 XRCC3O43542 346 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 ABLIM3O94929 683 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 NSA2O95478 260 aaKnown RBP7.63□□□□□ -1.19
NDE1-202ENST00000396355 PIPP12273 146 aaPredicted RBP7.63□□□□□ -1.19
NDE1-202ENST00000396355 TBPP20226 339 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 UQCRC2P22695 453 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 SNRPGP62308 76 aaKnown RBP7.63□□□□□ -1.19
NDE1-202ENST00000396355 TGM3Q08188 693 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 SLC36A2Q495M3 483 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 Q6ZNB5 142 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 ZNF620Q6ZNG0 422 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 Q6ZVU0 165 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 DCAF4L2Q8NA75 395 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 OR13C3Q8NGS6 347 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 FGF13Q92913 245 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 IRF7Q92985 503 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 SCAMP4Q969E2 229 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 APH1AQ96BI3 265 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 RASD2Q96D21 266 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 CMBLQ96DG6 245 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 KCNJ15Q99712 375 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 GAL3ST2Q9H3Q3 398 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 FKRPQ9H9S5 495 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 SOHLH2Q9NX45 425 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 ZNF586Q9NXT0 402 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 ZNF281Q9Y2X9 895 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 OTOGLQ3ZCN5 2332 aa7.63□□□□□ -1.19
NDE1-202ENST00000396355 DOCK8Q8NF50 2099 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 ELOA3CA0A087WX78 387 aaPredicted RBP7.62□□□□□ -1.19
NDE1-202ENST00000396355 ADRA2AP08913 450 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 KLK2P20151 261 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 ELAVL4P26378 380 aaKnown RBP7.62□□□□□ -1.19
NDE1-202ENST00000396355 CD70P32970 193 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 PCGF2P35227 344 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 CXCL12P48061 93 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 POLR2LP62875 67 aaKnown RBP7.62□□□□□ -1.19
NDE1-202ENST00000396355 HSF1Q00613 529 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 ST3GAL3Q11203 375 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 AMZ1Q400G9 498 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 TMEM255AQ5JRV8 349 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 CPEB2Q7Z5Q1 589 aaKnown RBP7.62□□□□□ -1.19
NDE1-202ENST00000396355 WFDC8Q8IUA0 241 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 FAM58AQ8N1B3 248 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 TMEM217Q8N7C4 229 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 ZNF738Q8NE65 137 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 OR4S1Q8NGB4 309 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 OR52E4Q8NGH9 312 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 OR52E2Q8NGJ4 325 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 ZNF461Q8TAF7 563 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 ADAMTS15Q8TE58 950 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 ASB17Q8WXJ9 295 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 SLC35G5Q96KT7 338 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 WWTR1Q9GZV5 400 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 MYNNQ9NPC7 610 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 ASIC5Q9NY37 505 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 GNG13Q9P2W3 67 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 TESQ9UGI8 421 aaKnown RBP7.62□□□□□ -1.19
NDE1-202ENST00000396355 SLC7A11Q9UPY5 501 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 ZNF337Q9Y3M9 751 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 ANKRD11Q6UB99 2663 aaPredicted RBP7.62□□□□□ -1.19
NDE1-202ENST00000396355 ZNF814B7Z6K7 855 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 GPANK1O95872 356 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 IRF2P14316 349 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 SELEP16581 610 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 CD33P20138 364 aa7.62□□□□□ -1.19
NDE1-202ENST00000396355 NBL1P41271 181 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms