RNA–Protein interactions for RNA: ENST00000394943.7

LIMA1-202, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-202ENST00000394943 TTKP33981 857 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 KIR3DL2P43630 455 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 PLP2Q04941 152 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 TPBGQ13641 420 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 MOGQ16653 247 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 ZNF829Q3KNS6 432 aaPredicted RBP6.01□□□□□ -1.45
LIMA1-202ENST00000394943 KBTBD8Q8NFY9 601 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 OR10H5Q8NGA6 315 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 PELI1Q96FA3 418 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 LURAP1Q96LR2 239 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 SLC30A2Q9BRI3 323 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 SLC22A4Q9H015 551 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 RHOFQ9HBH0 211 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 ZNF319Q9P2F9 582 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 SPEF1Q9Y4P9 236 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 TRBV5-7A0A0A0MS05 114 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 M0R135 149 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 FADS2O95864 444 aaKnown RBP6□□□□□ -1.45
LIMA1-202ENST00000394943 TTRP02766 147 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 IGFBP3P17936 291 aaPredicted RBP6□□□□□ -1.45
LIMA1-202ENST00000394943 APEX1P27695 318 aaKnown RBP6□□□□□ -1.45
LIMA1-202ENST00000394943 THBS4P35443 961 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 GDI2P50395 445 aaKnown RBP6□□□□□ -1.45
LIMA1-202ENST00000394943 ETV1P50549 477 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 TAS2R43P59537 309 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 RPS11P62280 158 aaKnown RBP eCLIP6□□□□□ -1.45
LIMA1-202ENST00000394943 TUBA4AP68366 448 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 ERI1Q8IV48 349 aaKnown RBP6□□□□□ -1.45
LIMA1-202ENST00000394943 OR5L1Q8NGL2 311 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 OR14K1Q8NGZ2 314 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 PHYHIPQ92561 330 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 RORBQ92753 470 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 MARVELD3Q96A59 401 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 SGK3Q96BR1 496 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 ZNF799Q96GE5 643 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 LRCH1Q9Y2L9 728 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 TPRKBQ9Y3C4 175 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 TVP23AA6NH52 213 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 PYCARD-AS1I3L0S3 204 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 PNPP00491 289 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 CRYAAP02489 173 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 SPARCP09486 303 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 PRF1P14222 555 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 GUCA1AP43080 201 aaPredicted RBP6□□□□□ -1.45
LIMA1-202ENST00000394943 FAM3AP98173 230 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 SMN1Q16637 294 aaKnown RBP6□□□□□ -1.45
LIMA1-202ENST00000394943 RPL22L1Q6P5R6 122 aaKnown RBP6□□□□□ -1.45
LIMA1-202ENST00000394943 ASCL4Q6XD76 172 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 RFPL4BQ6ZWI9 263 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 ZNF101Q8IZC7 436 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 AKAP1Q92667 903 aaKnown RBP eCLIP6□□□□□ -1.45
LIMA1-202ENST00000394943 MYDGFQ969H8 173 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 ERGIC1Q969X5 290 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 CA10Q9NS85 328 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 H2AFY2Q9P0M6 372 aaPredicted RBP6□□□□□ -1.45
LIMA1-202ENST00000394943 LAMP5Q9UJQ1 280 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 MYRFQ9Y2G1 1151 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 TMEM127O75204 238 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 ALDOBP05062 364 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 TACSTD2P09758 323 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 CPEP16870 476 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 PPP1CBP62140 327 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 PCGF3Q3KNV8 242 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 GLYATL3Q5SZD4 288 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 XAF1Q6GPH4 301 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 LRRC18Q8N456 261 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 AKR7LQ8NHP1 331 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 FCGR1BQ92637 280 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 POM121Q96HA1 1249 aa6□□□□□ -1.45
LIMA1-202ENST00000394943 VGLL3A8MV65 326 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 M0R1B8 84 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 ABCD4O14678 606 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 GPRIN2O60269 458 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 RAF1P04049 648 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 UBCP0CG48 685 aaKnown RBP5.99□□□□□ -1.45
LIMA1-202ENST00000394943 ACHEP22303 614 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 MPZP25189 248 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 HTR5AP47898 357 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 CX3CR1P49238 355 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 ZNF83P51522 516 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 RIDAP52758 137 aaKnown RBP5.99□□□□□ -1.45
LIMA1-202ENST00000394943 CDK5R1Q15078 307 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 SNAI3Q3KNW1 292 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 SYT6Q5T7P8 510 aaPredicted RBP5.99□□□□□ -1.45
LIMA1-202ENST00000394943 ZNF773Q6PK81 442 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 ZNF367Q7RTV3 350 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 PARP16Q8N5Y8 322 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 OR8B12Q8NGG6 310 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 OR6N2Q8NGY6 317 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 KLF14Q8TD94 323 aaPredicted RBP5.99□□□□□ -1.45
LIMA1-202ENST00000394943 THRSPQ92748 146 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 FBXW5Q969U6 566 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 MS4A3Q96HJ5 214 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 ALG8Q9BVK2 526 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 OR51V1Q9H2C8 321 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 ZCCHC4Q9H5U6 513 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 FRRS1LQ9P0K9 344 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 ZDHHC8Q9ULC8 765 aa5.99□□□□□ -1.45
LIMA1-202ENST00000394943 POLR3KQ9Y2Y1 108 aaPredicted RBP5.99□□□□□ -1.45
LIMA1-202ENST00000394943 NOP16Q9Y3C1 178 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms