RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 KDF1Q8NAX2 398 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-203ENST00000394872 BPIFCQ8NFQ6 507 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 SFT2D1Q8WV19 159 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 PCNPQ8WW12 178 aaKnown RBP9.41□□□□□ -0.9
COL4A6-203ENST00000394872 TTC9Q92623 222 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 SLC25A46Q96AG3 418 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 FYTTD1Q96QD9 318 aaKnown RBP9.41□□□□□ -0.9
COL4A6-203ENST00000394872 GDF2Q9UK05 429 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-203ENST00000394872 LAMB1P07942 1786 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 TRAV17A0A0B4J275 112 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 SH2D7A6NKC9 451 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-203ENST00000394872 ZNF26P17031 533 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-203ENST00000394872 POU3F3P20264 500 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-203ENST00000394872 RPS19P39019 145 aaKnown RBP9.41□□□□□ -0.9
COL4A6-203ENST00000394872 TRA2AQ13595 282 aaKnown RBP eCLIP9.41□□□□□ -0.9
COL4A6-203ENST00000394872 PCK2Q16822 640 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 TMEM182Q6ZP80 229 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-203ENST00000394872 NOXO1Q8NFA2 376 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 PCED1AQ9H1Q7 454 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 LIN7CQ9NUP9 197 aaKnown RBP9.41□□□□□ -0.9
COL4A6-203ENST00000394872 WBP1LQ9NX94 342 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 DDX60LQ5H9U9 1706 aaKnown RBP9.41□□□□□ -0.9
COL4A6-203ENST00000394872 TERTO14746 1132 aaKnown RBP9.41□□□□□ -0.9
COL4A6-203ENST00000394872 METTL15P1P0C7V9 234 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 ARRB2P32121 409 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 TJP1Q07157 1748 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 SPANXN5Q5MJ07 72 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 OR10K2Q6IF99 312 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 SLC51BQ86UW2 128 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 LILRB4Q8NHJ6 448 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 FAM90A27PA6NNH2 459 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 OR5G3P0C626 314 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 ZNF121P58317 390 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-203ENST00000394872 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-203ENST00000394872 YBX2Q9Y2T7 364 aaKnown RBP9.4□□□□□ -0.9
COL4A6-203ENST00000394872 M0QZ24 198 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 ETHE1O95571 254 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 NME1P15531 152 aaKnown RBP9.4□□□□□ -0.9
COL4A6-203ENST00000394872 CDAP32320 146 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 SUMO3P55854 103 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-203ENST00000394872 EIF3IQ13347 325 aaKnown RBP9.4□□□□□ -0.9
COL4A6-203ENST00000394872 WIPI1Q5MNZ9 446 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-203ENST00000394872 ADGRG3Q86Y34 549 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 CMTM4Q8IZR5 234 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 AKR7LQ8NHP1 331 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 JAM3Q9BX67 310 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 UGT2A1Q9Y4X1 527 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 NHSQ6T4R5 1651 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 TRBV5-4A0A0C4DH59 114 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 OR5H15A6NDH6 313 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 OR5H14A6NHG9 310 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 OR5H1A6NKK0 313 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 CTRB1P17538 263 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 RPS27P42677 84 aaKnown RBP9.4□□□□□ -0.9
COL4A6-203ENST00000394872 MEOX1P50221 254 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 CTRB2Q6GPI1 263 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 TMUB2Q71RG4 321 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 BTLAQ7Z6A9 289 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 TRMT61AQ96FX7 289 aaKnown RBP9.4□□□□□ -0.9
COL4A6-203ENST00000394872 COMMD5Q9GZQ3 224 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 SCPEP1Q9HB40 452 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 CT45A10P0DMU9 189 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 OR13C7P0DN81 318 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 GLI4P10075 376 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 OPRM1P35372 400 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 SMIM21Q3B7S5 101 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 VASH2Q86V25 355 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 OR13C8Q8NGS7 320 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 OR52I2Q8NH67 350 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 PKMYT1Q99640 499 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 NARFLQ9H6Q4 476 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 DLL4Q9NR61 685 aa9.4□□□□□ -0.9
COL4A6-203ENST00000394872 MN1Q10571 1320 aaPredicted RBP9.4□□□□□ -0.91
COL4A6-203ENST00000394872 RAB19A4D1S5 217 aa9.4□□□□□ -0.91
COL4A6-203ENST00000394872 MAGEB4O15481 346 aaPredicted RBP9.4□□□□□ -0.91
COL4A6-203ENST00000394872 DHHO43323 396 aa9.4□□□□□ -0.91
COL4A6-203ENST00000394872 SSSCA1O60232 199 aa9.4□□□□□ -0.91
COL4A6-203ENST00000394872 ADRA2CP18825 462 aa9.4□□□□□ -0.91
COL4A6-203ENST00000394872 MAGEB1P43366 347 aa9.4□□□□□ -0.91
COL4A6-203ENST00000394872 LRRC10Q5BKY1 277 aa9.4□□□□□ -0.91
COL4A6-203ENST00000394872 ST8SIA4Q92187 359 aa9.4□□□□□ -0.91
COL4A6-203ENST00000394872 TAAR6Q96RI8 345 aa9.4□□□□□ -0.91
COL4A6-203ENST00000394872 SLC25A37Q9NYZ2 338 aa9.4□□□□□ -0.91
COL4A6-203ENST00000394872 A0A0A6YYD5 115 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 SHISA8B8ZZ34 492 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 ST8SIA3O43173 380 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 DTYMKP23919 212 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 PTBP1P26599 531 aaKnown RBP eCLIP9.39□□□□□ -0.914e-6■■■■□ 21.1
COL4A6-203ENST00000394872 CEACAM16Q2WEN9 425 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 FAM122CQ6P4D5 195 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 CA5BP1Q8WTZ4 195 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 ALKBH3Q96Q83 286 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-203ENST00000394872 PLA2G12AQ9BZM1 189 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 FBXL4Q9UKA2 621 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 B3GALNT1O75752 331 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 TFAP2AP05549 437 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 METAP1P53582 386 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 IL11RAQ14626 422 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 SLC17A1Q14916 467 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 FAM26EQ8N5C1 309 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms