RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 RPS4XP62701 263 aaKnown RBP11.88□□□□□ -0.51
NFKB1-202ENST00000394820 MRPS21P82921 87 aaKnown RBP11.88□□□□□ -0.51
NFKB1-202ENST00000394820 EFNB1P98172 346 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 ACSM1Q08AH1 577 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 PRAMEF20Q5VT98 475 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 NAA40Q86UY6 237 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 RAB3CQ96E17 227 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 PTGES2Q9H7Z7 377 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 METTL7AQ9H8H3 244 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 PRELID3BQ9Y3B1 194 aa11.88□□□□□ -0.51
NFKB1-202ENST00000394820 EP300Q09472 2414 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-202ENST00000394820 A0A1W2PNR3 127 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 IGHV4-34P06331 123 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 ZNF93P35789 620 aaPredicted RBP11.87□□□□□ -0.51
NFKB1-202ENST00000394820 BLKP51451 505 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 EIF5AL1Q6IS14 154 aaKnown RBP11.87□□□□□ -0.51
NFKB1-202ENST00000394820 BAP18Q8IXM2 172 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 TMEM217Q8N7C4 229 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 TSPAN32Q96QS1 320 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 OR5B2Q96R09 309 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 RBM24Q9BX46 236 aaKnown RBP11.87□□□□□ -0.51
NFKB1-202ENST00000394820 TLNRD1Q9H1K6 362 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 LDAHQ9H6V9 325 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 PDE7BQ9NP56 450 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 MRPL22Q9NWU5 206 aaKnown RBP11.87□□□□□ -0.51
NFKB1-202ENST00000394820 MMP17Q9ULZ9 603 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 COL4A3Q01955 1670 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 ABCD4O14678 606 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 CRYBA1P05813 215 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 POU2F2P09086 479 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 HLA-DOBP13765 273 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 SLC17A1Q14916 467 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 C4orf17Q53FE4 359 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 CDCP2Q5VXM1 449 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 KIAA0895LQ68EN5 471 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 C20orf196Q8IYI0 205 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 OR52N4Q8NGI2 321 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 FLVCR1-AS1Q8TAF5 88 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 RNF141Q8WVD5 230 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 ZNF764Q96H86 408 aaPredicted RBP11.87□□□□□ -0.51
NFKB1-202ENST00000394820 C4orf45Q96LM5 186 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 USB1Q9BQ65 265 aaKnown RBP11.87□□□□□ -0.51
NFKB1-202ENST00000394820 KLHDC3Q9BQ90 382 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 LRRC61Q9BV99 259 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 NBASA2RRP1 2371 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 TMED7-TICAM2A0A0A6YYA0 188 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 KIR2DS5A0A0G2JLQ3 304 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 A0A0G2JNG1 304 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 OR4C45A6NMZ5 311 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 KIR2DS3K7RE56 304 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 ADH6P28332 368 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 CASRP41180 1078 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 CBX5P45973 191 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 NPBWR1P48145 328 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 SERTAD2Q14140 314 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 KIR2DS5Q14953 304 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 ZNF74Q16587 644 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 ADGRE4PQ86SQ3 457 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 TCEAL3Q969E4 200 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 TM4SF19Q96DZ7 209 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 WWTR1Q9GZV5 400 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 WDR13Q9H1Z4 485 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 PIGMQ9H3S5 423 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 LYRM4Q9HD34 91 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 MMP25Q9NPA2 562 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.87□□□□□ -0.51
NFKB1-202ENST00000394820 ZNF175Q9Y473 711 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 LRP12Q9Y561 859 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 MMP24Q9Y5R2 645 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 ETV7Q9Y603 341 aa11.87□□□□□ -0.51
NFKB1-202ENST00000394820 GPR179Q6PRD1 2367 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 SPTY2D1-AS1A0A0U1RR47 76 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 TNFRSF10CO14798 259 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 SEC14L5O43304 696 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 LY86O95711 162 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 NME1P15531 152 aaKnown RBP11.86□□□□□ -0.51
NFKB1-202ENST00000394820 GLRA1P23415 457 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 YPEL5P62699 121 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 MESTQ5EB52 335 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 ANKRD16Q6P6B7 361 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 C17orf78Q8N4C9 275 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 ZNF565Q8N9K5 539 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 FAM213BQ8TBF2 198 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 DMRTA2Q96SC8 542 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 STACQ99469 402 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 PFDN5Q99471 154 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 SEMA6CQ9H3T2 930 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 FN3KRPQ9HA64 309 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 SPACA1Q9HBV2 294 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 AMDHD2Q9Y303 409 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 MRPS18BQ9Y676 258 aaKnown RBP11.86□□□□□ -0.51
NFKB1-202ENST00000394820 IGHV3-64DA0A0J9YX35 117 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 RCC1P18754 421 aaPredicted RBP11.86□□□□□ -0.51
NFKB1-202ENST00000394820 FLI1Q01543 452 aaPredicted RBP11.86□□□□□ -0.51
NFKB1-202ENST00000394820 ZNF674Q2M3X9 581 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 C14orf28Q4W4Y0 310 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 Q6ZRG5 221 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 SPICQ8N5J4 248 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 SEH1LQ96EE3 360 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms